Protein Info for Atu5261 in Agrobacterium fabrum C58

Annotation: tannase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 549 signal peptide" amino acids 1 to 28 (28 residues), see Phobius details PF07519: Tannase" amino acids 77 to 547 (471 residues), 634.7 bits, see alignment E=6.1e-195

Best Hits

Swiss-Prot: 100% identical to Y5261_AGRFC: Uncharacterized esterase Atu5261 (Atu5261) from Agrobacterium fabrum (strain C58 / ATCC 33970)

KEGG orthology group: K09252, feruloyl esterase [EC: 3.1.1.73] (inferred from 100% identity to atu:Atu5261)

Predicted SEED Role

"Tannase and feruloyl esterase"

MetaCyc Pathways

Isozymes

Compare fitness of predicted isozymes for: 3.1.1.73

Use Curated BLAST to search for 3.1.1.73

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q8UK62 at UniProt or InterPro

Protein Sequence (549 amino acids)

>Atu5261 tannase (Agrobacterium fabrum C58)
MTSLLVATSRVVVTISLAYVPVKSAFAAPQNAAGLCSAIAASSIPASRISLPTTGAKIQS
ATLIGGSDPANQNGEYCKVIGQIKPVDPKAPDIIWQVNLPSVWNGKMLQYGGGGYNGSIP
PTTDKTTLGLDVVPTPLTQGYVTFGSDSGHQAPNADDASFAKNDEAMLNYGYMHIKKVLD
VAKVLVTERYEKPVTRVYFQGGSTGGREGLTAASRWPESYDGILTNYPTANFVGLRLWGA
GLARAVYDDKSAGWIPPKLVERISKEALKSCDGLDGVEDGLVGNMQQCRAQSAVLVQSLA
CKSDVTGNPDDCLTQAQIERTLKIYHEGYSLPYQLANGINTYPGYNSLEGIMMQLGSEPQ
MRTPPVSGPNAHHSSRSFEFLQNFVQRDQPLNLLSFDIREPGKLKDRIVELSDVIGATRT
DWSTFSDRGGKIIWLQGNDDPSVSPLGNAKLFESIVAKMGADKVKGFMRFFLVPGLAHGG
GRFSPTWDNLAALDNWVEHDVPPSNPVVVDATKSSTKGRSRPLCEYPSWPKYKGDGDVAI
ASSFSCADD