Protein Info for Atu4146 in Agrobacterium fabrum C58

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 625 TIGR02421: conserved hypothetical protein" amino acids 248 to 613 (366 residues), 462 bits, see alignment E=8.2e-143 PF08014: MATCAP" amino acids 274 to 615 (342 residues), 327 bits, see alignment E=7.4e-102

Best Hits

KEGG orthology group: None (inferred from 100% identity to atu:Atu4146)

Predicted SEED Role

"FIG01076455: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q7CU64 at UniProt or InterPro

Protein Sequence (625 amino acids)

>Atu4146 hypothetical protein (Agrobacterium fabrum C58)
MAGSSARRELSPIADLVDDVASCLEAGKAIRRDVGKDGRLHIDRPLPFLCLHLTGGTKNL
AARDIAAAHASYLIASNIQEAAPLIEAVGAAMRQRFGAFIVLDIGELEHDILLADDSPFL
PHYEVSVSATSEPETQKARRVFIKAVCDAEVRFRTPRITRPEPEADPVLRFHNAGLDFPC
ISVRFAPIYRQPESGADYPGLRETMIADLFDAGLQAFSSFSSGMDALTVTSHRALGRKAF
VDAVRRADRSVDEIVSSFDFLLSVTPINARRAFEEFRDGSFQFAPRLLYRPLGVDVEEQK
RKLYSVVFDHLEDPVLYHLYREKQQEIDLQLTMLASLHHRTFTDFSRALYGAVEPALLTL
ALRVLEDCPRAQETSEIAMVDCYAVAKKSREMVETYLGEEPEFKARVEIRDDLPPGLMVT
GEKLLISRHTVMEERRVEALLSHEIGVHLLTYFNGSSQGLRLFRTGLSGYEGVQEGLAVL
AEHLAGGMTRERLRLIAGRVVGCAAMLDGATFVDTFRIMTRDHGFDEAGAFNMVLRIYRG
GGLSKDAIYLRGLAEVLDHLRRGGALDPFWMGKIAAKHFPVMQELALRGLLRPPGVRPAF
LLPAKANERLEKIRAGLSIAELATL