Protein Info for Atu3861 in Agrobacterium fabrum C58

Annotation: acyl-CoA hydrolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF03061: 4HBT
  • amino acids 26 to 96 (71 residues), 66.6 bits, E=9.8e-23

Best Hits

Swiss-Prot: 51% identical to YCIA_SALTI: Acyl-CoA thioester hydrolase YciA (yciA) from Salmonella typhi

KEGG orthology group: K10806, acyl-CoA thioesterase YciA [EC: 3.1.2.-] (inferred from 100% identity to atu:Atu3861)

MetaCyc: 50% identical to acyl-CoA thioesterase YciA (Escherichia coli K-12 substr. MG1655)
Acyl-CoA hydrolase. [EC: 3.1.2.20]

Predicted SEED Role

No annotation

MetaCyc Pathways

• firefly bioluminescence (2/14 steps found)
• jasmonic acid biosynthesis (4/19 steps found)

KEGG Metabolic Maps

• Benzoate degradation via CoA ligation
• Biosynthesis of plant hormones
• Biosynthesis of unsaturated fatty acids
• Fatty acid biosynthesis
• Limonene and pinene degradation
• Ubiquinone and menaquinone biosynthesis
• alpha-Linolenic acid metabolism

Isozymes

Compare fitness of predicted isozymes for: 3.1.2.-

Use Curated BLAST to search for 3.1.2.- or 3.1.2.20

Sequence Analysis Tools

See Q7CTH0 at UniProt or InterPro

Protein Sequence (129 amino acids)

>Atu3861 acyl-CoA hydrolase (Agrobacterium fabrum C58)
MDQQPPADMELTLRTLAMPADANPAGDIFGGWVMSQMDLAAFVRANDVAGGRTVTVAVHE
IVFKKPVKIGDTLCVYTRIEKIGRTSVTLKIEAWTRRHYQDSRDKVTEAVFIMVAVDENG
EPRPVRKEA