Protein Info for Atu3633 in Agrobacterium fabrum C58

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 374 PF02492: cobW" amino acids 7 to 187 (181 residues), 155.6 bits, see alignment E=1.1e-49 PF07683: CobW_C" amino acids 253 to 348 (96 residues), 71.1 bits, see alignment E=6e-24

Best Hits

KEGG orthology group: None (inferred from 100% identity to atu:Atu3633)

Predicted SEED Role

"COG0523: Putative GTPases (G3E family)" in subsystem Transport of Zinc

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A9CFH0 at UniProt or InterPro

Protein Sequence (374 amino acids)

>Atu3633 hypothetical protein (Agrobacterium fabrum C58)
MSRDRIPVSIITGFLGAGKSTLLNRLLKDPEMSDAAIIINEFGDVSIDHMLVESAGEGII
ELAEGCLCCTVRGELVDTLAELIDGIQTGKLKPVKRVVIETTGLADPAPVMQSVMGNPVI
AQNFVLNGMITVVDAVNGLSTLDNHEEAVKQAAVADRLVMTKRTLADASAIAALTARLEA
LNPRATIEDGDKADWSAAGLLDNGLYDVSSKNADVGRWLGEESGHGHHDHDHDHDHAHGH
HHHHDVNRHDASIRSFSIIHDQPIDPMAIDMFVDLLRSAHGEKLLRMKAIVKLSDNPGRP
LVLHGVQNIFHTPERLAAWPDPTDQRTRMVLITKDLPEAFVKDLFAAFTGTPGIDRPDRQ
AMTDNPLAVSGLRF