Protein Info for Atu3607 in Agrobacterium fabrum C58

Annotation: cell division protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 335 transmembrane" amino acids 39 to 61 (23 residues), see Phobius details amino acids 184 to 206 (23 residues), see Phobius details amino acids 244 to 264 (21 residues), see Phobius details amino acids 284 to 306 (23 residues), see Phobius details

Best Hits

KEGG orthology group: K09811, cell division transport system permease protein (inferred from 100% identity to atu:Atu3607)

Predicted SEED Role

"Cell division protein FtsX" in subsystem Bacterial Cell Division

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A9CFF9 at UniProt or InterPro

Protein Sequence (335 amino acids)

>Atu3607 cell division protein (Agrobacterium fabrum C58)
MNEITRKPLKPEAAQPKRPPMRIRPMAPILPPSNIQGNALMVVIAIMAFLACLTLGAVSM
VRATAATWQSQISREITIQIKPEDGLNMEAALNKARNLALTFVGTRDGTILDDAATSRLL
EPWLGSGLDLSELPIPRLVVITIDESNPPDFQAMRDMLKTEIPQAFLDDHRTWVDRLVSM
ARTTVMIGVGVLILVFTAMVLTVVFATRGALSGNRHIVEVLHFVGAESSFVAREFQKHFL
KISLKGAAAGSALAAAVFLVAGFWQSSTVATPQSDQASALFGSFSVGLGGYLGIALTMII
IALLTTITARMTVIRTIDDIDRVRSDPSKSDGLAS