Protein Info for Atu2778 in Agrobacterium fabrum C58
Annotation: nicotinic acid mononucleotide adenyltransferase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 100% identical to NADD_AGRFC: Probable nicotinate-nucleotide adenylyltransferase (nadD) from Agrobacterium fabrum (strain C58 / ATCC 33970)
KEGG orthology group: K00969, nicotinate-nucleotide adenylyltransferase [EC: 2.7.7.18] (inferred from 100% identity to atu:Atu2778)Predicted SEED Role
"Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18)" in subsystem NAD and NADP cofactor biosynthesis global or NAD regulation (EC 2.7.7.18)
MetaCyc Pathways
- aspartate superpathway (24/25 steps found)
- NAD de novo biosynthesis I (6/6 steps found)
- NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde (4/4 steps found)
- NAD salvage pathway I (PNC VI cycle) (6/7 steps found)
- NAD de novo biosynthesis III (5/6 steps found)
- NAD de novo biosynthesis IV (anaerobic) (5/6 steps found)
- NAD salvage pathway II (PNC IV cycle) (4/5 steps found)
- NAD salvage pathway V (PNC V cycle) (4/5 steps found)
- NAD salvage (plants) (6/11 steps found)
- NAD de novo biosynthesis II (from tryptophan) (4/9 steps found)
- superpathway of NAD biosynthesis in eukaryotes (6/14 steps found)
KEGG Metabolic Maps
Isozymes
No predicted isozymesUse Curated BLAST to search for 2.7.7.18
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Compare to protein structures
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See Q8UBS2 at UniProt or InterPro
Protein Sequence (194 amino acids)
>Atu2778 nicotinic acid mononucleotide adenyltransferase (Agrobacterium fabrum C58) MPHVERGMVVGLFGGSFNPPHAGHALVAEIALRRLGLDQLWWMVTPGNPLKSRSELASLE DRIAACERLVSDPRIKVTAFEKSLGISYTANTLAKVKAKNPHVRFIWIMGADNLKSFHRW QKWREIAETFPIAVIDRPGSTLSYLSSTMAQAFSQARIDEDDAGVLWKKKAPAWVFIHGP RSTLSSTALRNNHK