Protein Info for Atu2767 in Agrobacterium fabrum C58

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 458 transmembrane" amino acids 21 to 44 (24 residues), see Phobius details amino acids 57 to 77 (21 residues), see Phobius details amino acids 89 to 107 (19 residues), see Phobius details amino acids 113 to 133 (21 residues), see Phobius details amino acids 153 to 174 (22 residues), see Phobius details amino acids 202 to 221 (20 residues), see Phobius details amino acids 264 to 286 (23 residues), see Phobius details amino acids 291 to 310 (20 residues), see Phobius details amino acids 320 to 338 (19 residues), see Phobius details amino acids 368 to 386 (19 residues), see Phobius details amino acids 402 to 424 (23 residues), see Phobius details amino acids 431 to 450 (20 residues), see Phobius details PF07690: MFS_1" amino acids 30 to 416 (387 residues), 50.7 bits, see alignment E=1.3e-17 PF11700: ATG22" amino acids 61 to 454 (394 residues), 98.2 bits, see alignment E=5e-32

Best Hits

KEGG orthology group: K06902, MFS transporter, UMF1 family (inferred from 100% identity to atu:Atu2767)

Predicted SEED Role

"Major facilitator superfamily MFS_1"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A9CHD4 at UniProt or InterPro

Protein Sequence (458 amino acids)

>Atu2767 hypothetical protein (Agrobacterium fabrum C58)
MTVPSQNAETVVAKRGIWGWVMFDWAAQPFFTVVTTFIFGPYFVARLTDDPISAQATWSN
MATVSSIIIALFSPILGSIADQSGARKPWIAFFAVIKIVSLFFLWFAAPGSPIILPIICM
ILASIAAEFSIVFNDSMMPRLTNPQNVGRISNLAWGLGYLGGMVVLIAVVTLLASNPQTG
LTIAGVKPLFGLDPATGEDARITGPLAALWYLVFILPMFLLTSDAEKGLPFAAAIRSGLG
ELKITLRELRYRPVLLRFLIARMLYQDGVNGVIILGGAFAAGMFGWATMEIGLFGILLNV
VAIAGCFAAGRLDQKLGSRITILISLALLLLATVGIVSTEKGSTLFGWIQLSTADNDRIF
ATGAEKAYLLYGVLIGLAFGPVQASSRSYLARNITVAEAGRYFGIYALSGRATSFMATLS
FSIATTISGSAHIGMATLIVFLGAGFLLLLRVPERTAG