Protein Info for Atu2724 in Agrobacterium fabrum C58

Annotation: MFS permease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 396 transmembrane" amino acids 21 to 39 (19 residues), see Phobius details amino acids 54 to 74 (21 residues), see Phobius details amino acids 85 to 103 (19 residues), see Phobius details amino acids 109 to 128 (20 residues), see Phobius details amino acids 148 to 169 (22 residues), see Phobius details amino acids 175 to 195 (21 residues), see Phobius details amino acids 214 to 233 (20 residues), see Phobius details amino acids 248 to 269 (22 residues), see Phobius details amino acids 280 to 299 (20 residues), see Phobius details amino acids 305 to 325 (21 residues), see Phobius details amino acids 336 to 360 (25 residues), see Phobius details amino acids 366 to 386 (21 residues), see Phobius details PF07690: MFS_1" amino acids 25 to 216 (192 residues), 71.5 bits, see alignment E=3.1e-24 amino acids 236 to 388 (153 residues), 39 bits, see alignment E=2.4e-14

Best Hits

KEGG orthology group: None (inferred from 100% identity to atu:Atu2724)

Predicted SEED Role

"Putative membrane protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A9CHG3 at UniProt or InterPro

Protein Sequence (396 amino acids)

>Atu2724 MFS permease (Agrobacterium fabrum C58)
MNGPTTFSPTGTRSSYLTRHRLGVSLLFLMNGFMMGSWAPKIPEFAARLSLSESALGLII
LVFGIGSLVFMPIAGSQIARFGSRTVSLVTAAIFLPTLLFISWAGTVWAGVIAVFLFGGL
TGAMDVAMNANAVAVERDMRRAIMSSCHAFWSLGGLIGAGLGGYLITAIGVQGHAIALTI
IALVLLVIAWPRVLADRPHPEEERPKGGLPLTPLPWIIGLMALFSMIPEGAILDWGALYL
RNELGASVSQSGFAFAAFSMTMAAMRFAGDLVRDKFGAVNTLRFCSAMSIIGLIIAGVAG
NSTIAIIGFAIAGIGISNMVPIAFSAAGNMPGLAPGIGLSVVTTMGYSGILVAPSAIGFI
AEHTGLASVFMALPLLHVVVLLLSRLARHADGAGKE