Protein Info for Atu2698 in Agrobacterium fabrum C58

Annotation: chorismate mutase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 105 TIGR01795: chorismate mutase" amino acids 6 to 99 (94 residues), 158.1 bits, see alignment E=3.4e-51 PF01817: CM_2" amino acids 13 to 91 (79 residues), 76.3 bits, see alignment E=8.6e-26

Best Hits

KEGG orthology group: K04092, chorismate mutase [EC: 5.4.99.5] (inferred from 100% identity to atu:Atu2698)

Predicted SEED Role

"Chorismate mutase I (EC 5.4.99.5)" in subsystem Chorismate Synthesis or Phenylalanine and Tyrosine Branches from Chorismate (EC 5.4.99.5)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 5.4.99.5

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A9CHH1 at UniProt or InterPro

Protein Sequence (105 amino acids)

>Atu2698 chorismate mutase (Agrobacterium fabrum C58)
MNNTEVKAQLSEYRQSIDNIDAALVHILAERFRCTKAVGVLKATYSLPPADPAREEYQIE
RLRRLAKDANLDPDFAEKFLNFVIKEVIRHHEAIAAEHGGHEKTA