Protein Info for Atu2572 in Agrobacterium fabrum C58

Annotation: acyl-CoA dehydrogenase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF02771: Acyl-CoA_dh_N
  • amino acids 23 to 100 (78 residues), 37.4 bits, E=3e-13
• PF00441: Acyl-CoA_dh_1
  • amino acids 232 to 367 (136 residues), 33.2 bits, E=5.7e-12

Best Hits

KEGG orthology group: K00249, acyl-CoA dehydrogenase [EC: 1.3.99.3] (inferred from 100% identity to atu:Atu2572)

Predicted SEED Role

"putative acyl-CoA dehydrogenase"

KEGG Metabolic Maps

• Fatty acid metabolism
• Propanoate metabolism
• Valine, leucine and isoleucine degradation
• beta-Alanine metabolism

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.3.99.3

Sequence Analysis Tools

See A9CHM8 at UniProt or InterPro

Protein Sequence (393 amino acids)

>Atu2572 acyl-CoA dehydrogenase (Agrobacterium fabrum C58)
MNVTVAPQDETLSARAGRVATIAAKHADDVDVTGRFPQEAVDALRRERLLGIQVPSSLGG
EGASIQEIADICARLGQACSATAMIFAMHHIKLSSLVEHGVDSTWHPGFMRRVAGEQLLL
GSATTEGGIGGNLRNSICAIEVEGDSCRLEKDATVISYGSNADAILITSRAHKDAAPADQ
VMTVFLKNQYTLEKTHVWDTLGMRGTCSDGFLFRGEAPAAQIFPKPFAEIAAQSMLASSH
LLWSAVWYGIASDAVLRAQSFVRAAARKSPGTAPPGAIRLAEVSTKLQVVKSNIIAGIKA
YEDTKSDPEKLMSMAFAVAMNNVKICSSETILEIIDHAMLVCGIMGYKNGTPYSLGRHLR
DAHSARLMISNDRILGNSANLLLVHRQDTSLLG