Protein Info for Atu2341 in Agrobacterium fabrum C58

Annotation: methyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 198 PF13489: Methyltransf_23" amino acids 31 to 136 (106 residues), 40.4 bits, see alignment E=6.5e-14 PF03848: TehB" amino acids 41 to 133 (93 residues), 22.8 bits, see alignment E=1.4e-08 PF13649: Methyltransf_25" amino acids 44 to 132 (89 residues), 38.1 bits, see alignment E=5.2e-13 PF08241: Methyltransf_11" amino acids 45 to 135 (91 residues), 35 bits, see alignment E=4.5e-12 PF08242: Methyltransf_12" amino acids 45 to 134 (90 residues), 34.7 bits, see alignment E=5.9e-12

Best Hits

KEGG orthology group: None (inferred from 100% identity to atu:Atu2341)

Predicted SEED Role

"Methyltransferase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A9CHZ1 at UniProt or InterPro

Protein Sequence (198 amino acids)

>Atu2341 methyltransferase (Agrobacterium fabrum C58)
MTARDDETIAFYSGHATAYTSRGQAPDRPHLETFLARLRAGAKILELGCGGGQDSEYMLS
AGFDVHPTDGTPDIAKAAQARLGIPVRTLLFENIEDAALYDAVWANACLLHVPRLALPGI
IGRIHTALKPGGVFYASFKAGEVEGRDTFGRYYNYPSKAWLEETYGQFAWTEVEIEARQG
SGYDKLPTDWLHVTATKA