Protein Info for Atu2257 in Agrobacterium fabrum C58

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 694 transmembrane" amino acids 6 to 29 (24 residues), see Phobius details amino acids 36 to 55 (20 residues), see Phobius details amino acids 669 to 690 (22 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 100% identity to atu:Atu2257)

Predicted SEED Role

"FIG003492: Threonine dehydrogenase and related Zn-dependent dehydrogenases" in subsystem Threonine degradation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A9CI42 at UniProt or InterPro

Protein Sequence (694 amino acids)

>Atu2257 hypothetical protein (Agrobacterium fabrum C58)
MTLTFAPFLPWIVIAILAVAALALSFIGLWRGVRGAWLRGLALVALLAAIANPLLTQEER
EPLSTIVPVIVDRSQSQDVQDRPQMTDTALETLKDRLSRFPRIEPRIVEVRDNGESDSPS
TQLFSALSSAVSDVSPSRVGGAIFLSDGQIHDIPNALPNAEQALGFRAPVHGLITGKADE
FDRRIEIVRAPRFGIVNEEQQLTLRVFDDGRPAGGGSAEVTVKMNGEEIATLQATPGQPT
PFSFKVPRGGNNVMEFSVAELPGEVTAANNRAVHLIEGIRQNLRVLLVSGEPHAGERAWR
NLLKSDASVDLVHFTILRPPEKQDGTPINELSLIAFPTRELFVEKINDFDLIIFDRYQHR
GVLPILYYDYIAQYVEKGGALLIAAGPEHAGQDSIAMTPLASVLPAQPTGQVHQAAFYPR
LSEAGKKHPVTRGLEGSGNEPPQWGRWFRTISVDPPQGQTVMLGDGQDPLLVLNRQGEGR
VAMLLSDQGWLWARGFEGGGPHVALYRRIAHWLMKEPELEEEALTARANGRTLQITRQTI
GDDPGQASVRFPSGKTENMAFTTTEPGLYRIERRMDETGLFEIKNGDFTTLVHVGAVDAP
EFKAMISTTETLKPLADATKGSVHRVADNSGRIALPDILPVRGDIRVADEDRMLIRLTDE
TVLKGVNTLPLFAGFAGLGALLLAFSALWWREGR