Protein Info for Atu2087 in Agrobacterium fabrum C58

Annotation: cell division protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 443 TIGR01174: cell division protein FtsA" amino acids 25 to 405 (381 residues), 348.3 bits, see alignment E=2.7e-108 PF14450: FtsA" amino acids 27 to 219 (193 residues), 32.8 bits, see alignment E=1.7e-11 amino acids 232 to 402 (171 residues), 119.9 bits, see alignment E=1.9e-38 PF02491: SHS2_FTSA" amino acids 113 to 187 (75 residues), 73.4 bits, see alignment E=3.1e-24 PF06723: MreB_Mbl" amino acids 179 to 379 (201 residues), 28.4 bits, see alignment E=1.5e-10 PF06277: EutA" amino acids 206 to 279 (74 residues), 27.5 bits, see alignment E=3.1e-10

Best Hits

Swiss-Prot: 100% identical to FTSA_AGRFC: Cell division protein FtsA (ftsA) from Agrobacterium fabrum (strain C58 / ATCC 33970)

KEGG orthology group: K03590, cell division protein FtsA (inferred from 100% identity to agr:AGROH133_07408)

Predicted SEED Role

"Cell division protein FtsA" in subsystem Bacterial Cell Division or Bacterial Cytoskeleton

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See P0A331 at UniProt or InterPro

Protein Sequence (443 amino acids)

>Atu2087 cell division protein (Agrobacterium fabrum C58)
MSFFGSSHFGLPRLKPLSSKRSHIVSVLDIGSTKVVCMIGRLTPRQESEILPGRTHKVEI
IGIGHQRSRGVKSGVIADLDALEGVIRLSVDAAERMAGLTVDSLIVNVSAGRLASDIYTA
SIDLGGQEVEASDLRKVLVAASQQSMRQDRAILHSLPTGYSLDGERGIRDPLSMYGDLLG
VDMHVVTVERTALKNLELCVNRAHLSVEGMVATPYASGLAALVDDEVELGCAAIDMGGGT
TTISVFAEGRLIHTDAIGLGGHHVTTDLARGLSTRIEDAERLKVVHGSALLNGADERDMI
SIPPIGEDDRDQPSQVSRALVTRIVRARIEETLELIRDRIQKSGFSPIVGKRVVLTGGAS
QLTGLPETARRILARNVRIGRPMGVAGLPVAAKGPAFSTACGLMIYPQVADIEIHAAQGG
MFSPFGNGSGRIARVGQWLKESF