Protein Info for Atu2086 in Agrobacterium fabrum C58

Annotation: cell division protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 583 TIGR00065: cell division protein FtsZ" amino acids 13 to 331 (319 residues), 398 bits, see alignment E=4.4e-123 PF00091: Tubulin" amino acids 16 to 177 (162 residues), 165.5 bits, see alignment E=1.8e-52 PF12327: FtsZ_C" amino acids 225 to 320 (96 residues), 128 bits, see alignment E=1.4e-41 TIGR03483: cell division protein FtsZ, alphaProteobacterial C-terminal extension" amino acids 471 to 583 (113 residues), 129.2 bits, see alignment E=1.3e-41

Best Hits

Swiss-Prot: 99% identical to FTSZ_RHIRD: Cell division protein FtsZ (ftsZ) from Rhizobium radiobacter

KEGG orthology group: K03531, cell division protein FtsZ (inferred from 100% identity to atu:Atu2086)

Predicted SEED Role

"Cell division protein FtsZ (EC 3.4.24.-)" in subsystem Bacterial Cell Division or Bacterial Cytoskeleton (EC 3.4.24.-)

Isozymes

Compare fitness of predicted isozymes for: 3.4.24.-

Use Curated BLAST to search for 3.4.24.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A9CIB1 at UniProt or InterPro

Protein Sequence (583 amino acids)

>Atu2086 cell division protein (Agrobacterium fabrum C58)
MTIQLQKPDITELKPRITVFGVGGGGGNAVNNMITAGLQGVDFVVANTDAQALTMTKADR
VIQLGVNVTEGLGAGSQPEVGRAAAEECIDEIIDHLNGTHMCFVTAGMGGGTGTGAAPVV
AQAARNKGILTVGVVTKPFHFEGGRRMRLAEQGIEELQKSVDTLIVIPNQNLFRIANDKT
TFADAFAMADQVLYSGVACITDLMVKEGLINLDFADVRSVMREMGRAMMGTGEASGPGRA
MQAAEAAIANPLLDETSMKGAQGLLISITGGRDLTLFEVDEAATRIREEVDPDANIILGA
TFDEALEGLIRVSVVATGIDRVAGIGEQNIAEMRAAAAKPLIRPSAAVAPAPAAVQPAHA
VSQAPKTVDQIAQTIRSAEAEMERELGFAAHQQPSQDFRPQSKLFASSPAEAPAALRPAQ
PVQQAAPAPVAQAPVYHAPEQVAVPAPRMQQPQAPVYQEPAPVARQPEPVRMPKVEDFPP
VVKAEMDHRDRATPVAQEERGPMGLLKRITNSLGRREEEEVPSDMMDAPSMAPQRRAPLS
PEASLYAPRRGQLDDHGRATPSSSSHHDDDQLEIPAFLRRQSN