Protein Info for Atu0945 in Agrobacterium fabrum C58

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 486 PF02696: SelO" amino acids 2 to 456 (455 residues), 388 bits, see alignment E=3.3e-120

Best Hits

Swiss-Prot: 100% identical to SELO_AGRFC: Protein adenylyltransferase SelO (selO) from Agrobacterium fabrum (strain C58 / ATCC 33970)

KEGG orthology group: None (inferred from 100% identity to atu:Atu0945)

Predicted SEED Role

"Selenoprotein O and cysteine-containing homologs"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q8UGU0 at UniProt or InterPro

Protein Sequence (486 amino acids)

>Atu0945 hypothetical protein (Agrobacterium fabrum C58)
MKFDNSYAHLPERFSAAVLPTPVKAPRLIAFNRTLAEELLLDVADLDDDRLAAIFSGNVV
PQGAEPLAMAYAGHQFGGFVPQLGDGRAILLGEVIDVNGRRRDIQLKGSGPTPFSRRGDG
RAALGPVLREYIVSEAMFALGIPATRALAAVLSGDRVQREVGLPGGVFTRVAASHIRVGT
FQFFAAREDDEAIRSLADYVIDRHYPDAKNTENPYLALLRGIAERQCALIARWMMVGFIH
GVMNTDNMAVSGETIDFGPCAFLDEYHPNKVFSSIDAQGRYAYNNQPGIAQWNIARLAEC
LLPLLDPEVEKAAELANAVLADFAAAFPQRWLTGMREKLGLTTEEEGDMDLIQSLLSLMQ
ASEADFTLTFRRLSHAANGDAEPFRGMFIDIAGADAFLTRWRERAGREGISDSERSAAML
SINPAIIPRNHRIEELIEAAVEDGDFEPFHAMLTAIATPFEERPDNFVYMQPPMSHERVF
RTFCGT