Protein Info for Atu0311 in Agrobacterium fabrum C58

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 510 TIGR00368: Mg chelatase-like protein" amino acids 7 to 500 (494 residues), 508.6 bits, see alignment E=8.2e-157 PF13541: ChlI" amino acids 20 to 140 (121 residues), 134.9 bits, see alignment E=4.2e-43 PF01078: Mg_chelatase" amino acids 189 to 394 (206 residues), 310.6 bits, see alignment E=1.3e-96 PF07728: AAA_5" amino acids 212 to 347 (136 residues), 36.6 bits, see alignment E=1.3e-12 PF13335: Mg_chelatase_C" amino acids 402 to 500 (99 residues), 101.4 bits, see alignment E=1e-32

Best Hits

KEGG orthology group: K07391, magnesium chelatase family protein (inferred from 100% identity to atu:Atu0311)

Predicted SEED Role

"MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q7D1Q2 at UniProt or InterPro

Protein Sequence (510 amino acids)

>Atu0311 hypothetical protein (Agrobacterium fabrum C58)
MVARVNTVAFQGIEGVPVEVQVMVAPGKIGIQIVGLPDKAVAESRERVQAALHASGLALP
AKKVTVNLAPADLPKEGSHFDLPIALGLMAALGAIPAEALSQYVVLGELNLDGTIGTVSG
ALPAAIGANALGKGLICPAESGPEAAWAGAGIDILAPRSLIALANHFRGTQLLSRPTPAI
RANPVNLPDLADIKGQESARRAMEVAAAGGHNLLMVGPPGSGKSMLAARLPSILPPLEVA
ELLEVSMVHSIAGQLSGGKLSDRRPFRTPHHSATMAALIGGGLRARPGEASLAHHGVLFL
DEFPEFSPQVLDALRQPLETGECIIARANHRVSYPAEIQLVAAMNPCRCGMAGEPGFTCA
RGPRCVTDYQSRISGPLLDRIDIRIDVPAVSATDLIRPVVSEPSAVVAARVARARLAQQE
RYAAAGFPAIRTNARCTTTLIEKYAEPDASGLQLLRDAAERLKFSARGYHRILKVARTLA
DLDGKQTVGRIHVAEAVSYRIAGERLTVAA