Protein Info for AMB_RS19505 in Magnetospirillum magneticum AMB-1

Annotation: cell division protein FtsZ

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 558 TIGR00065: cell division protein FtsZ" amino acids 10 to 327 (318 residues), 405.3 bits, see alignment E=1.3e-125 PF00091: Tubulin" amino acids 15 to 175 (161 residues), 165.4 bits, see alignment E=2e-52 PF12327: FtsZ_C" amino acids 224 to 318 (95 residues), 135.8 bits, see alignment E=5.2e-44

Best Hits

KEGG orthology group: K03531, cell division protein FtsZ (inferred from 100% identity to mag:amb3854)

Predicted SEED Role

"Cell division protein FtsZ (EC 3.4.24.-)" in subsystem Bacterial Cell Division or Bacterial Cytoskeleton (EC 3.4.24.-)

Isozymes

Compare fitness of predicted isozymes for: 3.4.24.-

Use Curated BLAST to search for 3.4.24.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2W0G7 at UniProt or InterPro

Protein Sequence (558 amino acids)

>AMB_RS19505 cell division protein FtsZ (Magnetospirillum magneticum AMB-1)
MLTFLPGAHQELKPRITVVGVGGAGGNAVNNMILSRLEGVEFIVANTDSQSLGQSRTERR
IQLGNQVTQGLGAGSRPDIGRAAAEESLEEILGQIGGANMVFITAGMGGGTGSGAAPVIA
RAAREQGILTVGVVTKPFHFEGAHRMRTAEGAIEELQQFVDTLIIIPNQNLFRVATERTT
FADAFKMADDVLYSGVRGVTDLMIMPGLINLDFADIRTVMSEMGKAMMGTGEAEGDKRAI
DAAEAAISNPLLDDTSMKGARGVLINITGGMDMTLFEVDEAANRIRDEVDPDANIIFGST
FDEKLNGKMRVSVVATGIASEAAAQPKPTVISLVTPAAQPAAPAPAPAARPAAAAVQAPI
FRPQTAAQPAVAASTISAPAAAVAHAHQPVHRPAVAAQVQPELDIGRPEPMARHEPMMRA
EPMVRTEALARAEARPEPELRLDAEMRAEPGMDSRHEPVLGRAQADMRSQHEMKDLHKAL
SDISEAPAAPVLAPQPPQETRRMGGLLDRLVNRHRAPAQPAPQPQPAPQPRMEARREPTA
SRAGEDLDIPAFLRRQAN