Protein Info for AMB_RS19065 in Magnetospirillum magneticum AMB-1

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1215 PF13289: SIR2_2" amino acids 126 to 269 (144 residues), 53.5 bits, see alignment E=1.4e-18

Best Hits

KEGG orthology group: None (inferred from 100% identity to mag:amb3766)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2W0Q5 at UniProt or InterPro

Protein Sequence (1215 amino acids)

>AMB_RS19065 hypothetical protein (Magnetospirillum magneticum AMB-1)
MKTFVPNGPIFPEELLQAHEEGRLVLFCGAGISYYTGLPTFSRLVELAMEGCGVAFDRKE
KHHPLHRAFMDGKYDRALQMLEQAAPAMRTEVMGILEQPPKPGTEDAPLHRALLTIARTS
AGQTQIVTSNFDDRFDRADVNLRWQAGPRLGIPRLDHWSGPTYLHGRIDRAHDPDGRDLV
LTSGDFGKAYLRDAWAARYVVELFREFTVLFVGYSLNDPIVGYLVDALAADMGPNRQFRK
AYALAEFSGSDVDEKRQTDAWQAKHVEPILFRKLGGKNPYRLLNDSLLEWARHHASGLGS
RIDEALTLGAKPSPTKIVTQEARNLAWALSKGDGSVARAFAQAERAPDVSWLEPLSQVKL
HHPASGQDFGLFDWPSPTDKGPHLAPLAGGRSSMLPLAPATWELGRWLSRHMRSRALVDW
VIARNGRVHPDWQYFLEQKFSELPDDGTWKPFWRLILDHATSPQVSRWYFRPLARREDLP
PPGWSMALLEAARPYLSIHKPFQWGRDASAPPEQLSDLARFELQLADDDFVQTALDALDK
PAFQAEMLGVADQLTSRLAEGMELLQRGGSYIGGLSDRFSLIDPEGRGVQGYTPLVWLCV
RIFMLARADQPDVAVALARRWMNLWQVNRLFLFRRLALHALAYAPELPDREGLDFLLGNN
QEALWAYDCEPELARFLTERVPHFSSNTRDELIAAIVAGPPQREYRNLDADDIAAMRQGQ
INRRLGKLRQAGLDAPLPADAKPEDMADAQPVRLMRISREDESAAALLGLPPEETVEALL
NQSGRFTASRQLAELALEGPDQVLSCLPLLVNQCPPDWDGWGGLADLAKTEGADRYLDPI
AQFVQDHEAHIADTLLWALANLIRSWGDRAVGEEAFRTSFLRLWERLWRAALRHVEAPSE
MEAVTKAINAPGGILAETITDLILALPEETGQAVQPCWGMTIEGEEEAHLHGRIIATSRL
LWLHRMFAEATRQILLPRMMAAHAEALGLWEGYFWGRHWDVPLMQELVPAFLSMAGRFQK
QDCTEAWSQMFADILVEAPGLFAKDDVARVMRNARVEDLRAMAWHFFQRLSGAEAKAGEL
WTTAIRPIIGKTWPATIAQNTPEVASALVQVALHCGPQFGDAVEILVRRKLLRPLGRHHG
LLHDLEEPDENQPDFCADFPEAVLGLLDQTTDADIAHWDARSLRTILERLSNARPELAQT
PAYRKLHLITERHGQ