Protein Info for AMB_RS14645 in Magnetospirillum magneticum AMB-1

Annotation: sulfite exporter TauE/SafE family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 229 transmembrane" amino acids 12 to 34 (23 residues), see Phobius details amino acids 54 to 77 (24 residues), see Phobius details amino acids 83 to 103 (21 residues), see Phobius details amino acids 124 to 152 (29 residues), see Phobius details amino acids 165 to 189 (25 residues), see Phobius details amino acids 197 to 221 (25 residues), see Phobius details PF13386: DsbD_2" amino acids 10 to 210 (201 residues), 144.9 bits, see alignment E=1.5e-46

Best Hits

KEGG orthology group: None (inferred from 100% identity to mag:amb2910)

Predicted SEED Role

"Membrane protein, putative"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2W361 at UniProt or InterPro

Protein Sequence (229 amino acids)

>AMB_RS14645 sulfite exporter TauE/SafE family protein (Magnetospirillum magneticum AMB-1)
MGGELDYTLAFMAGILGSGHCVGMCGSLVSACFVRMGENGRGALPALAYHGARISIYGLV
GLVAAALGLALVSTGIVGKVQGVLQIVAGLVVIALGLDILGWLPRRLPLIGMPMRSFGKY
YFAAASKGAVPGAALAGVMNGLMPCALTLAVAVKATAAPQVWQGGALMLAFGLGTLPSML
FVSLVLGCLGSRARGWLLKGAAVVVIALGAATLMQGLRFFAVMKNLPNW