Protein Info for AMB_RS10790 in Magnetospirillum magneticum AMB-1

Annotation: class I SAM-dependent methyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 323 PF02353: CMAS" amino acids 101 to 212 (112 residues), 33 bits, see alignment E=1.9e-11 PF13489: Methyltransf_23" amino acids 101 to 218 (118 residues), 57.7 bits, see alignment E=5.7e-19 PF05175: MTS" amino acids 103 to 213 (111 residues), 24.2 bits, see alignment E=1.1e-08 PF07021: MetW" amino acids 106 to 204 (99 residues), 23.2 bits, see alignment E=2.2e-08 PF01209: Ubie_methyltran" amino acids 110 to 215 (106 residues), 31.3 bits, see alignment E=5.9e-11 PF13847: Methyltransf_31" amino acids 113 to 216 (104 residues), 52.6 bits, see alignment E=2e-17 PF13649: Methyltransf_25" amino acids 117 to 209 (93 residues), 74.5 bits, see alignment E=4.1e-24 PF08241: Methyltransf_11" amino acids 118 to 212 (95 residues), 79.4 bits, see alignment E=1.2e-25 PF08242: Methyltransf_12" amino acids 118 to 210 (93 residues), 52.3 bits, see alignment E=3.7e-17

Best Hits

KEGG orthology group: None (inferred from 100% identity to mag:amb2135)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2W5D6 at UniProt or InterPro

Protein Sequence (323 amino acids)

>AMB_RS10790 class I SAM-dependent methyltransferase (Magnetospirillum magneticum AMB-1)
MDPSRRDAGSHGQIPHDMGLGCGVAHRAAAHQEVPDVAPGGQPHAVLDPSDQGRAGAAVG
SHHGAQHDGGVKGRDWAIDRSGGHPLTVILEIEESVMDKRRNTDVIVETLALKGKRVIDV
GCGDGGLVRALARFGAHVLGVECSPRQLAKARAAAKVADEEIVDGVGQALPVDDESADAV
VFFNSLHHIPIAFQAKALAEAARVLRPGGEVYVSEPLPWGAFFEAVRPIDDETWVRGAAL
SSVKGAWVHGLEEASEFTYLHPMVFKSYEAFRDKIVSANAEREGKFEDLDAEMRERFARL
AAPAEDGGFAFEQPMRVNLLRKE