Protein Info for AMB_RS07490 in Magnetospirillum magneticum AMB-1

Annotation: aldehyde oxidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 913 PF00111: Fer2" amino acids 8 to 57 (50 residues), 29 bits, see alignment 2e-10 PF01799: Fer2_2" amino acids 74 to 146 (73 residues), 84.5 bits, see alignment E=1.1e-27 PF01315: Ald_Xan_dh_C" amino acids 180 to 268 (89 residues), 48.2 bits, see alignment E=3.1e-16 PF02738: MoCoBD_1" amino acids 305 to 546 (242 residues), 258.5 bits, see alignment E=1.2e-80 PF20256: MoCoBD_2" amino acids 575 to 846 (272 residues), 245.2 bits, see alignment E=2.5e-76

Best Hits

KEGG orthology group: None (inferred from 100% identity to mag:amb1483)

Predicted SEED Role

"Possible hypoxanthine oxidase XdhD (EC 1.-.-.-)" in subsystem Purine conversions (EC 1.-.-.-)

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 1.-.-.-

Use Curated BLAST to search for 1.-.-.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2W788 at UniProt or InterPro

Protein Sequence (913 amino acids)

>AMB_RS07490 aldehyde oxidase (Magnetospirillum magneticum AMB-1)
MKRQTLSINGTSHSLEVPPMRRLSKVLREDLGLRGTKVGCDAGDCGACTVLIDGESVCSC
MIPVGRLTGREIITVEGLSEGAALGRLQRAFEHFGAAQCGICTPGMLNAATALLRSRPRP
SEDEVLDAIGGVLCRCTGYRKIVQAVVESHRFADEPVVPEAGSSVGTRLRRLDGRQRVDG
SEIYGDDVCPPDCLLVRVIRSPHPHARFTIGDLTALRVAYPGIVQVLTAADVPGINLFSV
IPGMEDQPAFAEGLVRYRGEAVAAVVMEADTNDIFQDADFPVLWEVLEPALSMEQATAAD
AVLLHAKRPGNILVRGFVQKGDLDLHWAKAAQVVEDSFTTGFVEHAYIEPEAGYARRVGD
TIEIYACTQAPYMDRDSVAAIMALPPEQVRIIPTAVGGGFGGKLDVSLQPYVALAAWSLG
RPVRCLYTRTESMASSTKRHPAAITARVGAGADGKLTAMEFDGDFNTGAYASWGPTVANR
VPVHCSGPYFIPALRARTRAIHTNNPPSGAFRGFGIPQASIAQESLFDQLADKLGLDRLE
FRRINAITAGQPTATGQILTASVGQQACFDALVPRWQEALAAAEAFNRTAGDRRRGVGVA
GMWYGCGNTSMSNPSTIRVALRADGAVVLFQGAVDIGQGSNTVITQICADALGIEIGKFT
LVMGDTALTADAGKTSASRQTFVSGRASQLAGLDLRDKILRMVNAGADSRLSLDGSILCV
SDGADTHQIDLQSLARDQDGLVMDGEGTFDPPTEKLDANGQGIPYATYGFGAQMAEVEVD
TALGTVKVLKIIAAHDVGRAINPMLLEGQIEGGIAQGLGLALMEEYIQGRTENLHDYLIP
TAGDIPPIETIIIEDAEPLGPFGAKGIGEQALIPTAPAILGAIRHATGVTIRQVPATPDR
VRAAIRAAKGVPS