Protein Info for AMB_RS07055 in Magnetospirillum magneticum AMB-1

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1144 transmembrane" amino acids 823 to 843 (21 residues), see Phobius details amino acids 852 to 873 (22 residues), see Phobius details amino acids 896 to 916 (21 residues), see Phobius details amino acids 1112 to 1132 (21 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 100% identity to mag:amb1394)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2W7H7 at UniProt or InterPro

Protein Sequence (1144 amino acids)

>AMB_RS07055 hypothetical protein (Magnetospirillum magneticum AMB-1)
MIQDAIPSTDILVDSNSANPVGTFVNPVNSMVEGLVIAAQGSGTLCHAARSTASPTGWAL
NPITTSATPLEVVGGTAYAGQKYAAVYGFYSDGAALWSIALGADGVTWGSPVQVVAGGVS
QLGTAYSPAGQLVVYGCTAAGDLLVAYQTTLNGAFTTTSCDVGGTLAGNSASLVMVDETG
WNAVIVQNNVPSLYTGSLGDTGALNTGTFQSLPSGTLISEVSLGFWSSIQQDCIFLMTSQ
SGQVYTVAPGGQPATAVGASLPTGTSVRYAGGHATNVTDLGIVLDLYMVDSDLCLWVMHQ
SQTEPWDMNGNPVFSSPVPLGAGVAGVFGDLNPADGTSLFTIDDQEGALCLWLADAGTGN
WVSNPVLTSGTEIYEVTRFKVQMAVSDQNYCPMPNQSLTLALSPGSSAADITIGGNSYFL
GSQSPLTVTTDGQGNIVASILTTSSLFAPGLVLSCQGTTLATVQPASDIQAYLSGQGTLN
PYNPGGALPVFDKDGTTLSKATIGNDNQPLAPNLKGNPALAKAAAQAIIGGAQAGQGTGT
TAGFAVQFDPKTGQATFRHLHSHDEVRTERSDLAASPLCGSIWSDIGDWAGDIWQGIKNG
VIIITSAVVDLAKQIATLVVKIGDEISAAFDMAIHGIEEAAQFIGGVFQWIGAEIETAIS
WLEALLDFGAIWRTKMAIQSCLVNGLGSCITGLGTMKSAADGWFDQEEATVKAYFTQLAG
TLANQTMSSQTGGQSPGNAPSSTPQAGNLSAAGTTSNVQGSWLSDQVNSNGGVNTQTITP
GDALQQALTDFTTAWNGACGDFDTAFQDFWQGLSSTLSDPQAFATLGLPAFVDGLGALID
GFLELAKGVVDVLFDLAIAAIAAVGDALTASMGDGFLGDLWAWMAGKAGYPDDADFNLVA
VISLIIAFPGTVFYKLAYPDNGEPFPAGDPLPYAPSAPGAKGPGSVGFTIPTGWMEFVSI
CNIMAYIPRLVSDIAGPDNPELIEWTLCGLSFTDFLLHVINEDDLTWDDLIDEPDAWSWV
LVKLPAAISRGVNALMKEDDPEGREGPGEDEGTGGYVAMRLIAGFCRAAELGANIYYLCN
NSCSSAETAYRIIDPIPDILDMSNMPSVRDTTAGAIWVGVMTVINMFLNFFAPTLELKME
QEGQ