Protein Info for AMB_RS03980 in Magnetospirillum magneticum AMB-1

Annotation: serine/threonine protein phosphatase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 262 PF00149: Metallophos" amino acids 30 to 224 (195 residues), 53.2 bits, see alignment E=2.6e-18

Best Hits

KEGG orthology group: K07313, serine/threonine protein phosphatase 1 [EC: 3.1.3.16] (inferred from 100% identity to mag:amb0777)

Predicted SEED Role

No annotation

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.1.3.16

Use Curated BLAST to search for 3.1.3.16

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2W994 at UniProt or InterPro

Protein Sequence (262 amino acids)

>AMB_RS03980 serine/threonine protein phosphatase (Magnetospirillum magneticum AMB-1)
MQKSIIGEAPALVEMIDESLPPLHRVPPGIRVYAIGDVHGRLDLLDRLLAQIAGDVDGIP
AERIVLVFLGDLIDRGADSRAVVERVIKGAGEGPLAGVRIVCLRGNHEDTMLEFLADFSV
GPRWFRNGGLEAIRSYVGEVDAKLALDYPRLQKMLYRAMPAHHLRFLSSIPTWHQEGDYL
FVHAGVRPAVPLERQDPYDLMWIREPFLGADQRWEKMVVHGHTVVSEPEVRPHRIGIDTG
AYRTGRLTALVLEEDRRRFLFT