Protein Info for AMB_RS03790 in Magnetospirillum magneticum AMB-1

Annotation: aminopeptidase P family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 603 PF01321: Creatinase_N" amino acids 13 to 144 (132 residues), 44.3 bits, see alignment E=5e-15 PF16189: Creatinase_N_2" amino acids 155 to 314 (160 residues), 121.9 bits, see alignment E=5.9e-39 PF00557: Peptidase_M24" amino acids 318 to 531 (214 residues), 186 bits, see alignment E=1.5e-58 PF16188: Peptidase_M24_C" amino acids 543 to 602 (60 residues), 79.6 bits, see alignment 2.6e-26

Best Hits

KEGG orthology group: K01262, Xaa-Pro aminopeptidase [EC: 3.4.11.9] (inferred from 100% identity to mag:amb0738)

Predicted SEED Role

"Xaa-Pro aminopeptidase (EC 3.4.11.9)" (EC 3.4.11.9)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.4.11.9

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2W9D3 at UniProt or InterPro

Protein Sequence (603 amino acids)

>AMB_RS03790 aminopeptidase P family protein (Magnetospirillum magneticum AMB-1)
MSPHQPAPSPTDRLADLRAELARLNLTGFVVPRADQHQGEYVPPSAQRLGWLTGFTGSAG
SAVVLRDKAAIFVDGRYTLQVLAEVNTQLFTPLHLVEQPPHRWAGEVLSKGDRLGFDPWL
HTHDQVQSLTAACERAGATLVPCPDNPVDAVWAGRPPAPATPISAHPERFAGRSAAAKRG
DIAAELARERLDAAVLSAPESLAWLLNIRADDVAYTPLPLGFAVIYADASVDLFVQPDRI
DDTVTAPWGDAVRVAEPAAFEATLRLLGRGGKRVRLDSSSAPFQVWETLRAAGARVEPGS
DPCALPRACKNAVEMAGTRAAHLRDGAAMVRFLAWLDRTTRSGTVSEMEAADALEGFRRT
GEHFRGLSFPTISGAGANGAIVHYHSTAKTNRPLAAGELYLVDSGAQYLDGTTDITRTIL
VGDAPPDEARRRFTLVLKGHIALARAVFPMGTTGSQLDILARRPLWSAGLDYDHGTGHGV
GSFLSVHEGPQRISKVGNSVALKPGMILSNEPGYYKTGAYGIRIENLVMVEPRPAPAGAE
RDLLEFETLTLVPIDRALVAEDLLDRDERDWLNAYHARVRDAIVPQLTEAAERDWLEQAT
ATL