Protein Info for AMB_RS00550 in Magnetospirillum magneticum AMB-1

Annotation: DUF751 domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 632 transmembrane" amino acids 20 to 39 (20 residues), see Phobius details amino acids 47 to 66 (20 residues), see Phobius details amino acids 72 to 91 (20 residues), see Phobius details amino acids 109 to 126 (18 residues), see Phobius details amino acids 142 to 161 (20 residues), see Phobius details amino acids 168 to 187 (20 residues), see Phobius details amino acids 193 to 213 (21 residues), see Phobius details amino acids 220 to 238 (19 residues), see Phobius details amino acids 245 to 263 (19 residues), see Phobius details amino acids 275 to 302 (28 residues), see Phobius details amino acids 313 to 331 (19 residues), see Phobius details amino acids 343 to 359 (17 residues), see Phobius details amino acids 379 to 395 (17 residues), see Phobius details amino acids 407 to 427 (21 residues), see Phobius details amino acids 439 to 457 (19 residues), see Phobius details amino acids 469 to 490 (22 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 100% identity to mag:amb0109)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2WB62 at UniProt or InterPro

Protein Sequence (632 amino acids)

>AMB_RS00550 DUF751 domain-containing protein (Magnetospirillum magneticum AMB-1)
MIADFETFLALLVSGPQEALTAGWVVAFLIPAVLIGRVLGRPGIEGASFGLLVLTAAADM
ALFLLRGALGPVAWHLPLTVTLVGMLSFILRRWALPRPLAQRPLDRTDWMLMILAGGAFW
ALRTVQINPSTSLSSQLGWVPLYLRESFVAGSFLLPGDFAFGIGPVGSLFYSVDMLGVSA
LAGGLGAQHFYPPYLATSVLGVGLAVLLPLAALRRRPLAQVAYLVILGGLMFADFQVRAG
IGRHWGDTVMILGGSLIMTTLASRPCGRRSILTAATAAAFLVLARHYAAFFAALLMIGMA
AWAMTRWGFRTLLGWWPAWAAIAGLLGLLAWREIGYILHPTPFYPGGRLLVMGGSGWLYH
LKGMLHDWGLMTGGSWTPLGPRSLWLAALLFLLAADRKRCLRQPRRLSVLLAPLAVMLLP
LCLELVTGYRSSGVSNKPYLLAAMFGAFYPAFALRWLAPAHKAARVVRIGLASTLAMALL
WVTVGAATGYGPGKALNWGREIYDGQIIDRGIALALAAEGVPVEWVADRPLMYFFCEPGM
GLRNYVGGSLRQDSDYWSKEIQDALKESSDFPGILARKGWPNLYLSSPLNYAEYVEGGAA
ARPAELDTLESQPWVERVVRFRDARLVIVKRP