Protein Info for ABZR88_RS16370 in Mucilaginibacter yixingensis YX-36 DSM 26809

Annotation: DUF2723 domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1056 transmembrane" amino acids 7 to 25 (19 residues), see Phobius details amino acids 74 to 100 (27 residues), see Phobius details amino acids 114 to 134 (21 residues), see Phobius details amino acids 178 to 207 (30 residues), see Phobius details amino acids 219 to 238 (20 residues), see Phobius details amino acids 258 to 281 (24 residues), see Phobius details amino acids 288 to 307 (20 residues), see Phobius details amino acids 313 to 330 (18 residues), see Phobius details amino acids 337 to 361 (25 residues), see Phobius details amino acids 531 to 550 (20 residues), see Phobius details amino acids 557 to 575 (19 residues), see Phobius details amino acids 587 to 611 (25 residues), see Phobius details amino acids 622 to 640 (19 residues), see Phobius details PF11028: DUF2723" amino acids 34 to 213 (180 residues), 244.8 bits, see alignment E=2.5e-77

Best Hits

Predicted SEED Role

"membrane protein, putative"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1056 amino acids)

>ABZR88_RS16370 DUF2723 domain-containing protein (Mucilaginibacter yixingensis YX-36 DSM 26809)
MSYSKINNLFGWIAFLIASLTYILTLEPSASFWDCGEFIACIYRLQVAHQPGAPLFTMIG
KVFSLLSMGDVHRVAYWTNIASALASGATILFLFWSITALGRKLLIKKESDENITNIILI
MGAGLVGALAYTYSDTFWFSAVESEVYAQSSLCTAIVFWAIMKWDANADKPHADRWLVFI
AYVMGLSIGVHLLNLLVIPAIAIVIYFRRAKTITGKGTLWAFVLGIIALGVILWGIIQYT
VKGAAYFDLIFVNTFKMGFGSGAVTFFLLLIGAIILGIYYTVKPQKPVIVAAAIIFVLLF
TVCGSAVDATTGVIGLVFSAGVVALLEYVVKIRQKRYVFNMILVSTLFILFGYSSFVMLI
IRAKASPNLNNSDPEDAFTLNSYLNRDQYGDTPLMYGQFFDAKAIDQKETAPIYRRGKTQ
YEVAGHKISTVYDHNTLFPRIYKGDKPDAAQFYRDWLHMGPEDKPGMAQNLGFFFSWQIN
QMYTRYFLWNFVGRTNDLDGQNDSYGIDGNWTNPFKNRSHYPYSVTKSKSYNQLFALPLI
LGLIGAFYHFGRNQKDAGVVGLLFFFTGLAIVLYLNQDPLQPRERDYAYAGSFYAFAIWI
GLAVIAIGDWLGKIKSISPKTGAVIASVACLLAAPVLMASQEWDDHDRSTKTTPRDMATN
YLESCAPNAILFTYGDNDTYPLWYAQEVENVRPDVRIVNLSLLGTDWYIRQMKQKMNESD
PLPITMPNEKFEAGVRDVIYADDKKLNGSTELKDVFDFLTSDDDRAKELLLQDTPPVNYL
PTKNFKLTLDANELVKQGVIPADKKDSVKKEMEWKYPSNYVTKDNLAMMDILAHNNWKRP
IYFTITVGTDNMMGLQNYLYQEGFAYRLLPIAVDTAKQETLQAANTMTMYHNMMDKFKWG
NMKNARYLDHESTTMFYPLIAKQFASLTDHLIKDGRTAEAKLALHRYDDVQPNLMPYVDV
MIHKYGLVINAYKVGDTQLANKWVNQIDDYLTNLMDYYANNQRTGSGPINSREIQLSLSV
FNGFVGVTKDAHQDALSKKLETQFTSYASTFGMATK