Protein Info for ABZR88_RS13465 in Mucilaginibacter yixingensis YX-36 DSM 26809

Annotation: glycosyl hydrolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1140 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details PF17132: Glyco_hydro_106" amino acids 34 to 865 (832 residues), 577.7 bits, see alignment E=2.3e-177

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1140 amino acids)

>ABZR88_RS13465 glycosyl hydrolase (Mucilaginibacter yixingensis YX-36 DSM 26809)
MLKKLILGYALLLSAGCISFAQAQSPLSRGSFSTPPDTNKINAWWHWMSGYITKDGITKD
LEAMNAQGIHSATILNIDRLKNLEGNPQVKFGSPEWYEMFRFAIAEAKRLGMTIGTSNCD
GWSESGGPWLKPENSMKQYIWRKTFINGGRHVTVKLNEPVGLQNFYKDDRILAYQSAGAN
SFDLAHPSTKLNGVAIGDTVTDGSPVSVMECKPGTIIDLTFGKAFTAEKIEIATNRIRTS
AAKDVAHFNLLAGNNENDLHQIAVIDVPVNNEVFSISIPRTTAAVYRLELPKDKPQPKTI
EIGDVALLGKDEVGDYHPAIGHLLTKTVTSEGQRLQQFYEDVPGMPKAEPVGDVIDVTDK
VQNGILKWKAPAGNWTILRFGFTTTGRTNHPASKEGEGLECDKMDTTALNLHYHSFPEKL
IKEAGSDAGKTFEYFLVDSWECMLQNWTDNFEHEFEKRRGYSMIPYLPVLCGEVVKDVPS
SEAFLHDYRSTIADLIGEYYFKHLADLCHRSGMKFYGEGIYGGVIYPPLDILKAYKYFDV
PMTEFWARWNAVDTPYVYVPSGVMNHNLVSHAAFLYHKPVLGAESYTGLALYSDSPWDIK
LYGDNVFAQGVNQVFLHSYVHQPNERKPGLTLGVYGLTFNRHNTWWPFAGSYFKEQARMQ
YLLQHSDATPQVLIYQGDEMPFDQFRPASNLLSEAITYNYCNWDILLNHLSVKDGKLWLD
NQSSFVFLILPDEKLDLRTLERIAQLVEQGATVYGRKPQTTFTLKDKAVNDQKLTTLADS
IFDKDYGKGHFYPLDALKSSGIVPDVQLKGIGQNGLLTLHKRAGTTEIYELTNTDNFKPV
SFEAGFVVGDKTPSSWDAETGEVTNPGIYTQQSGTTWLPVTLRPKQSLFYVFEAGAGDKA
HIQTIQDQAGHTLFPSADNQVVPMPSASINSAGQLTISNPKGGVYRMVTSQEKSIDISLR
AAQRISLDTAADIKLESEPDVKVTDMKLHSFTDATDAAIKYYSGVARYTIDVDLPESFFG
NGKIIQLKIPRFGAAAGITCNDRSVGDIWEPNFPLNITALVHPGKNTLVIRAVNPWRNRI
IGDFVQPRGDKNVFTTSTLQAVNDPAAIPVIDKTSKLLSSGLSAPIEIISFDQIDLTNKL