Protein Info for ABZR88_RS11250 in Mucilaginibacter yixingensis YX-36 DSM 26809

Annotation: ABC-F family ATP-binding cassette domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF00005: ABC_tran
  • amino acids 18 to 192 (175 residues), 96.5 bits, E=8e-31
  • amino acids 344 to 473 (130 residues), 66.7 bits, E=1.3e-21
• PF12848: ABC_tran_Xtn
  • amino acids 231 to 311 (81 residues), 80.1 bits, E=3.8e-26

Best Hits

KEGG orthology group: K06158, ATP-binding cassette, sub-family F, member 3 (inferred from 89% identity to psn:Pedsa_1264)

Predicted SEED Role

"ABC transporter ATP-binding protein uup"

Protein Sequence (544 amino acids)

>ABZR88_RS11250 ABC-F family ATP-binding cassette domain-containing protein (Mucilaginibacter yixingensis YX-36 DSM 26809)
MINVNNISVSFGGTTLFSDVTFSINENDKIALMGKNGAGKSTILKIIAGAAKPTSGNVTG
PKEAVIAYLPQHLLTQDNVTVFEETMKAFDEANQMQKELDELNEQLTIRTDYESDDYMKL
IERVSELSEKVYSQEETNYDAEVEKVLKGLGFERKDFTRQTSEFSGGWRMRIELAKILLK
KPDLILLDEPTNHMDIESIQWLEDFLVNSAKAVMVISHDRAFVDNITNRTIEVTMGRIYD
YKAKYTHYLQLRAERRVHQVKAYEEQQRFIADNQEFIDRFRGTYSKTLQVQSRVKMLEKL
EIIQIDEVDTSALRLKFPPSPRSGQYPVMVEDLTKTYGDHVVFKNAAMVIERGEKVAFVG
KNGEGKSTMIKAIMGEIDFEGSLKVGHNAKIGYFAQNQAALLDENLTVFETIDQIPLSDG
TIKIKDLLGAFMFSGDDTTKKVKVLSGGEKTRLAMIKLLLEPVNVLILDEPTNHLDMKTK
DIIKDALRDFDGTLILVSHDRDFLDGLVQKVFEFGNKRVREHFEDIKGFLAYKKMDSLKE
IEQS