Protein Info for ABZR88_RS07220 in Mucilaginibacter yixingensis YX-36 DSM 26809

Annotation: FAD-dependent oxidoreductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 764 signal peptide" amino acids 12 to 20 (9 residues), see Phobius details transmembrane" amino acids 21 to 34 (14 residues), see Phobius details PF00890: FAD_binding_2" amino acids 21 to 67 (47 residues), 26.3 bits, see alignment 6.4e-10 PF12831: FAD_oxidored" amino acids 21 to 433 (413 residues), 317.4 bits, see alignment E=3e-98 PF13450: NAD_binding_8" amino acids 23 to 61 (39 residues), 25.2 bits, see alignment 2.4e-09

Best Hits

KEGG orthology group: None (inferred from 67% identity to shg:Sph21_1996)

Predicted SEED Role

"FIG00554817: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (764 amino acids)

>ABZR88_RS07220 FAD-dependent oxidoreductase (Mucilaginibacter yixingensis YX-36 DSM 26809)
MIKDTTNAKRALHQQQLSAGLVITGGGLSGVCAAITAARAGTKVILVQDRPVLGGNSSSE
VRLWILGATSHMGNNNRWSREGGVIDEILVENTHHNPEGNPLILDMILLDKVKQEGNITL
LLNTAVFDLEKSDADTISSLKAFCSQNSTEYLLTAPLFCDASGDGIVGFLAGAAFRMGAE
AADEFDEQMAPSAQYGELLGHSLYFYSKDTGKPVKFIPPSFALDDITKIPRYRSFNANEF
GCKLWWVEYGGRLDTIHQTEEIKWELWRVIYGVWNHIKNSGQFPEAENLTLEWVGTIPGK
RESRRFEGDYMLSQRDLTEQRPHHDAVAYGGWSIDLHPADGVFSERPGCNQWHSKGIFSI
PYRTLYSRNISNLFLAGRIISVSHVAFGATRVMATSAYVGQAVGMAATLCLKQGLLPAQL
LQETQLNELQTMLMKAGQYIPGLTLNDGADLVQQAAVKASSTLKFKGFDAVDAWKSLAIS
AGMLMPFKAGKLPVFTVPARSSATTKLLCELWICSRSGSFTPDVLMTSNTLTVNGDVELE
LDFDVVLPEAGYAFIIFRQNAAIELGYTDQRITGIVSVFNLINKAVSNYGKQSPPPGTGV
DEFEFWCPQRRPEGQNIALKLSEAQDLFEAENISNGVDRPVMQPNAWVADRDDINPSLTL
EWSSVQIISSMTLCFDTDFDHPMESVLMTHPETTMPFCVRDYRVVDASGREIYAATNNYQ
TRNEIKFDEPVETAKLTIYVQHPLPHVPAALFAVRCYGPQQAAN