Protein Info for ABZR88_RS05135 in Mucilaginibacter yixingensis YX-36 DSM 26809

Annotation: MgtC/SapB family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 219 transmembrane" amino acids 14 to 32 (19 residues), see Phobius details amino acids 44 to 66 (23 residues), see Phobius details amino acids 72 to 89 (18 residues), see Phobius details amino acids 97 to 113 (17 residues), see Phobius details amino acids 119 to 141 (23 residues), see Phobius details PF02308: MgtC" amino acids 22 to 140 (119 residues), 131.9 bits, see alignment E=8e-43

Best Hits

Predicted SEED Role

"Mg(2+) transport ATPase protein C"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (219 amino acids)

>ABZR88_RS05135 MgtC/SapB family protein (Mucilaginibacter yixingensis YX-36 DSM 26809)
MLHNMIQGFDMPTMLQELLMVCVAILIGAVIGTEREYSNKSAGLRTFILVSFGSCVFTIL
SIKIGVSNPDRLAANIITGIGFLGAGVIFKDNNKIEGITTATTIWATASVGMSAGSGHIY
MALAGTLVILVILKLLLPLQAYIDNHHKIREYHIATATPADADECIALFKQYQLKYFLLG
EDSSPVSFSRTWLITGNIKNHEQLIANLIHHPKVISYRF