Protein Info for ABZR88_RS04410 in Mucilaginibacter yixingensis YX-36 DSM 26809

Annotation: glycosyltransferase family 4 protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 358 PF20706: GT4-conflict" amino acids 150 to 293 (144 residues), 30 bits, see alignment E=4e-11 PF00534: Glycos_transf_1" amino acids 179 to 333 (155 residues), 78.5 bits, see alignment E=6.8e-26 PF13692: Glyco_trans_1_4" amino acids 191 to 321 (131 residues), 59.2 bits, see alignment E=8.5e-20

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (358 amino acids)

>ABZR88_RS04410 glycosyltransferase family 4 protein (Mucilaginibacter yixingensis YX-36 DSM 26809)
MKVALITRTTLYSTPGGDTIQIQQTASQLKALGIDADVLPADAEIDYERYDLLHFFNITR
PADILQHQRASGKPSVISTILVDYSEFDRKHRPGLSGIIFNLLPADSIEYLKAIARFVRK
KDKLNSVDYLWKGQRRSMHEVLSKAALILPNSHSEYRRIVKKYGTNMPHMIVPNGINPEL
FVDNGSPKDENLVLCVARIEGLKNQLNLIRALNNTRFRLLIIGAHSANQLAYYEACRREA
AANVQFIDHIPQQELLAYYQRAKVHVLPSWFETTGLSSLEAAAMGCNLVITDKGDTRDYF
SDDAWYCDPQSTQSIYDNIVAASRQPYRQRLRQYLLENCTWQQAARITLNAYQTILSS