Protein Info for ABZR88_RS03275 in Mucilaginibacter yixingensis YX-36 DSM 26809

Annotation: DUF58 domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 293 PF01882: DUF58" amino acids 39 to 124 (86 residues), 83.6 bits, see alignment E=9.4e-28 PF13519: VWA_2" amino acids 82 to 186 (105 residues), 70.9 bits, see alignment E=1.3e-23

Best Hits

KEGG orthology group: None (inferred from 79% identity to phe:Phep_1479)

Predicted SEED Role

"hypothetical protein PA3071"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (293 amino acids)

>ABZR88_RS03275 DUF58 domain-containing protein (Mucilaginibacter yixingensis YX-36 DSM 26809)
MAKDTKDLLSKVRKIEIKTRGLSSHLFQGEYHSAFKGRGMAFSEVREYQVGDEIRTIDWN
VTARFNHPYVKVFDEERELTFMLLMDVSGSELFGTQHQLKQELATELCAVLAFSAIQNND
KVGVIFFSDKIEKFIPPKKGRSHILMIIRELIDFKPESKGTDIAGAIKYFSGVIKKRCTA
FVISDFISPAFEDELKIANKKHDIIALKLFDKHEEEFPDLGLIPMKDEESGEVMWVNTGD
KEVRKAFSAQAIKRNRMLQDTFKRTGVDYATIGTHESYVKPLMTLFKKRGSKR