Protein Info for ABZR88_RS02810 in Mucilaginibacter yixingensis YX-36 DSM 26809

Annotation: GH92 family glycosyl hydrolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 864 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details PF17678: Glyco_hydro_92N" amino acids 33 to 255 (223 residues), 281.3 bits, see alignment E=1.5e-87 TIGR01180: putative alpha-1,2-mannosidase" amino acids 336 to 763 (428 residues), 431.8 bits, see alignment E=2.2e-133 PF07971: Glyco_hydro_92" amino acids 341 to 756 (416 residues), 512.2 bits, see alignment E=3.2e-157 PF13290: CHB_HEX_C_1" amino acids 791 to 850 (60 residues), 73.4 bits, see alignment 2.3e-24 PF13287: Fn3_assoc" amino acids 801 to 849 (49 residues), 60.3 bits, see alignment 3.2e-20

Best Hits

Predicted SEED Role

"Alpha-1,2-mannosidase" in subsystem Mannose Metabolism

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (864 amino acids)

>ABZR88_RS02810 GH92 family glycosyl hydrolase (Mucilaginibacter yixingensis YX-36 DSM 26809)
MKNALRYLIPSLFLGGLMLQASAQKKIDNTPSVNVFIGTGGHGHTYPGPSMPFGMVQLSP
DTRLEGWDGCSGYHYTDSLVYGFSHTHLSGTGCSDYGDILFMPTTGEPKLLNTEYRSSFR
KKYESGSPGYYKTRLDKYNVNVELTATPRVGVHHYDYPNTPQANIIIDLKHRDEVRDAWI
EVVNDHEVRGFRRSKGWAEDQYVYFYARFSKPFKTYGVALNDQVQQGKTKVEGKNVKMYL
QFDNPGDVVSEVALSSVSAEGALKNLDAEMHDYGFDFKKIEKAAHNTWVNELAKIQVEGG
SPPPQQSLQSAQNLYNGYNPYGGYSVGPQPKAPPVVIDQGKIKRNIFYTALYHTMLAPNI
YNDVDGQYRGMDQKVHTANGFNYYTIFSLWDTYRAEHPLLTIIDKKRTLDFIKTFLAMYD
EDGVLPVWPVGSWETYCMVGNHSIPVIVDAYSKGVRDFNTDKALYAMKAVVNRKQFGLGS
YKNNGAVLADDNDESVSKTLEYAIDDWCIAQFAKMLNKQADYDEYIKRAQYWKNLYNNQN
GYLQARTNGSWYAPFDPSEVNQNYTEGNARQYAFLVPQDVETLIAKMGGRNKFEARLDEL
FNTKAKITGKDQPDISGLIGQYAHGNEPSHHIAYLYNFTDDPTKTQLYLSKIMKDEYSDG
PDGLAGNEDCGQMSAWYVMSALGIYNLMPGGQQYQVGLPQFDKAVISLENGKKFTVYNAA
AASSNIYLQGMSLNKKPYNKLYLTYDDINKGGDFEYFAGRLPNRLFVQDLEKPSSKIVDD
LIVSNPYFVAPSGTFKDNISIEIKCADADAKIYYTTDGSAPTASSTLYAAPVKLTKTTIL
KAIAVKDGKSSFVDAGVFKKGDGK