Protein Info for ABZR88_RS01200 in Mucilaginibacter yixingensis YX-36 DSM 26809
Annotation: adenine phosphoribosyltransferase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 54% identical to APT_CYTH3: Adenine phosphoribosyltransferase (apt) from Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
KEGG orthology group: K00759, adenine phosphoribosyltransferase [EC: 2.4.2.7] (inferred from 63% identity to shg:Sph21_2249)MetaCyc: 48% identical to adenine phosphoribosyltransferase (Escherichia coli K-12 substr. MG1655)
Adenine phosphoribosyltransferase. [EC: 2.4.2.7]
Predicted SEED Role
"Adenine phosphoribosyltransferase (EC 2.4.2.7)" in subsystem Purine conversions or cAMP signaling in bacteria (EC 2.4.2.7)
MetaCyc Pathways
- superpathway of purine nucleotide salvage (13/14 steps found)
- adenine and adenosine salvage I (2/2 steps found)
- guanine and guanosine salvage I (2/2 steps found)
- adenine salvage (2/3 steps found)
- superpathway of guanine and guanosine salvage (2/3 steps found)
- adenine and adenosine salvage II (1/2 steps found)
- guanine and guanosine salvage II (1/2 steps found)
- glyphosate degradation III (2/7 steps found)
- (aminomethyl)phosphonate degradation (2/8 steps found)
KEGG Metabolic Maps
Isozymes
No predicted isozymesUse Curated BLAST to search for 2.4.2.7
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (175 amino acids)
>ABZR88_RS01200 adenine phosphoribosyltransferase (Mucilaginibacter yixingensis YX-36 DSM 26809) MIEQRIKASIRDIHDFPKPGIIFKDITPILKDAQLCEGILDAFVEQLKGTEIDVVAGVES RGFLFGLSLACRLGVPFVPVRKAGKLPYAIKQKVYELEYGQATIELHTDAFEPGARVLIH DDLLATGGTVTAASELIAEMGGTVVGFSFVVGLGFLNGKEKIEPISENIVVLAGY