Protein Info for ABIE41_RS20835 in Bosea sp. OAE506

Annotation: cytochrome P450

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 454 transmembrane" amino acids 403 to 423 (21 residues), see Phobius details PF00067: p450" amino acids 51 to 444 (394 residues), 249.3 bits, see alignment E=3.8e-78

Best Hits

KEGG orthology group: None (inferred from 59% identity to avi:Avi_2585)

Predicted SEED Role

"COG2124: Cytochrome P450"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (454 amino acids)

>ABIE41_RS20835 cytochrome P450 (Bosea sp. OAE506)
MTTLDALALTQPPGLVESRRATLSVIASLLRNPLQALPPEVYRERLVLAKTAGRSSLYVC
DPALIQEALTRQAGKLGKGELIRKVLGPAIGEGLLTADGGHWRWQRQAVASGFQHEKLLG
FLPEMIEAAQATRGRWQAASAPLDIGHEMMRTTFDIIIETMLSGAQALDVGKVEQAISDY
LEPSNYMFIYNLFGLPDWMPYPGRAKARASVTYLRENLRALVAQRRDEPPENGDLLDMLL
ASADPETSRAMSDEEIVDNLLTFVTAGHETTALGLAWTFHLLAKNRDWEAKVLDEIAAVT
EGGPLQPRHIAALPLTKAVFQEAMRLYPPAPVITREVEEPFTLGGVALKQGMVLYVPIQA
VHRHEQLWDRPEQFDPSRFLGDAARGRHRYAYLPFGAGPRICIGSAFATMEAVAILAVLL
PALRLEPLPGKAPEPTLKITLRPKQPLRMRAVAR