Protein Info for ABIE41_RS20135 in Bosea sp. OAE506

Annotation: SDR family oxidoreductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 573 signal peptide" amino acids 1 to 20 (20 residues), see Phobius details PF13761: DUF4166" amino acids 390 to 551 (162 residues), 113.1 bits, see alignment E=6.5e-37

Best Hits

KEGG orthology group: None (inferred from 53% identity to hdn:Hden_2740)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (573 amino acids)

>ABIE41_RS20135 SDR family oxidoreductase (Bosea sp. OAE506)
MTRRVLLIGGTGVFGRRLARHLAATPGLELLITSRDAGKARTLASAITPIPGTTISGLGF
DHCREPSNEIARLAPWLVIDASGPFQGAGYEVPLAALSAGAHVVDLADARDYILGYGAAL
DGLARERGLVALAGASSTPALSTAAVAALTTGWQRIDTLDIAITPGGRSEVGEAVIAAIL
SYAGRLIPIWREGALQATDGWLDSRRIAIPGLGRRRVAAVETVDAQWLGPSLNVQSRVAF
RAGLESPVEQWGIMSLAWLRRHGAIGRLDALIPALLAARRITRLPTSDRGGMLVTVTGLD
AQGRFRRSCWSLLAEHGDGPHVPTLPAAAALQALLNGRLTPGARPAIGVLTLAEIEAESA
PYAITTRREEAVHDQSIVRQALGEAAFAALPAPLTAFHAPEGPPVWHGRACIEAGSHPLA
RLLRWLIGLPSAAWDLPVTVTVDRVTGAQGEAEVWTRNFGGSRFSSRLSVDGRGRLEEAF
GPMRFGLDVMTSADGLTLAVSGARCLGIPLPRLLLPRSEAREHTDDQGRFRFDIRLTLPF
VGLLTHYRGWLVPAGGAVTQPELAEASPRPSSD