Protein Info for ABIE41_RS13575 in Bosea sp. OAE506

Annotation: FAD-binding oxidoreductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF01266: DAO
  • amino acids 4 to 397 (394 residues), 213 bits, E=9.5e-67
• PF13450: NAD_binding_8
  • amino acids 7 to 37 (31 residues), 22.7 bits, see alignment (E = 1e-08)

Best Hits

KEGG orthology group: K00285, D-amino-acid dehydrogenase [EC: 1.4.99.1] (inferred from 63% identity to smd:Smed_0342)

Predicted SEED Role

"D-amino acid dehydrogenase small subunit (EC 1.4.99.1)" in subsystem Pyruvate Alanine Serine Interconversions or Respiratory dehydrogenases 1 (EC 1.4.99.1)

KEGG Metabolic Maps

• Nitrogen metabolism
• Phenylalanine metabolism

Isozymes

Compare fitness of predicted isozymes for: 1.4.99.1

Use Curated BLAST to search for 1.4.99.1

Protein Sequence (416 amino acids)

>ABIE41_RS13575 FAD-binding oxidoreductase (Bosea sp. OAE506)
MATDTIVLGAGIVGISVALHLQKAGRSVLLVDKRGPGEETSYGNAGLIQREGVYPYGFPH
DFGALIRYAMNNTIDAHYHWSAIPKLAPFLWSYWMHSRASQHEAIAHKYATLIEHCVSEH
DALAQEAGATGLLRRKGWMKVFRTAAQQDERLAEAARWNRDFGLNYRPLDMATLKAEEPH
LDHDSLIGGLHWTDPVTVIDPLDLSKAYVARFEELGGKLALGDAGTLAQEGAEWSVTLAD
GTTVKARDVVVALGPWADVLSRRLGYNLPLAVKRGYHMHYKAQGNAVLNHPVLDTERGYF
LAPMQQGIRLTTGAEFADRDAPKTPVQLERAEPIARTLFPLGERIDPEPWLGRRPCTPDM
MPIIGPAPKHKGLWFSFGHAHHGLTLAAVTGRMIAEMVTGQKVFVDPTPFAPARFA