Protein Info for ABIE41_RS03115 in Bosea sp. OAE506

Annotation: MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 572 transmembrane" amino acids 43 to 65 (23 residues), see Phobius details amino acids 76 to 98 (23 residues), see Phobius details amino acids 106 to 127 (22 residues), see Phobius details amino acids 133 to 153 (21 residues), see Phobius details amino acids 187 to 214 (28 residues), see Phobius details amino acids 226 to 244 (19 residues), see Phobius details amino acids 256 to 274 (19 residues), see Phobius details amino acids 280 to 303 (24 residues), see Phobius details amino acids 315 to 334 (20 residues), see Phobius details amino acids 340 to 361 (22 residues), see Phobius details amino acids 373 to 392 (20 residues), see Phobius details amino acids 404 to 422 (19 residues), see Phobius details PF05977: MFS_3" amino acids 31 to 549 (519 residues), 693.8 bits, see alignment E=1.4e-212 PF07690: MFS_1" amino acids 45 to 388 (344 residues), 111.3 bits, see alignment E=4.9e-36

Best Hits

KEGG orthology group: None (inferred from 63% identity to sme:SMc02910)

Predicted SEED Role

"MFS permease"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (572 amino acids)

>ABIE41_RS03115 MFS transporter (Bosea sp. OAE506)
MPDDPHAQPVADVARAELAAEGVEPASERNSLFVPLRQPIFRAVWIASLASNFGGLVQMV
GASWMMTAIADSPDMVALVQASTTLPVMLFSLTAGAIADNYDRRRIMLTAQGFLLAVSVL
LAAAAWLDLMTPWLLLGFTFLIGCGTALNNPAWQSSVGDMVPRRDVPAAVTLNSVAFNIA
RSVGPAIGGAIVAAAGAVAAFVLNAFSYIALITVLARWRPPKVERVLPRETLLIAMGAGV
RYVAMSPNIRSVILRAFAYGFGGIVALALLPLIARDLVQGGPLVFGILLGAFGAGAVVGA
FLSARLRRMLSTESLVRATFGANALAAALVGISTTMWLTLPALAVAGACWVMTLSTFNAT
VQLSAPRWVVGRALAIYQMAAFGGMAGGSWVWGQAVLHYGPEQALLLAAFSLLAGAALGF
RYRLPPLEALNLDPLSRWREPKVAVDIEPRSGPVIVTIEWLIREEDVVEFLKAMAERRRI
RRRDGARHWTLLRDLTDPELWIERYDTPTWVEYVRQAQRITQADAEITDRVRALHKGPNP
PVVHRMIEREPATLPRGLPPQQSREDGPGHPG