Protein Info for ABIE41_RS02895 in Bosea sp. OAE506

Annotation: GtrA family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 143 transmembrane" amino acids 12 to 35 (24 residues), see Phobius details amino acids 44 to 63 (20 residues), see Phobius details amino acids 83 to 102 (20 residues), see Phobius details amino acids 108 to 127 (20 residues), see Phobius details PF04138: GtrA" amino acids 19 to 133 (115 residues), 69.9 bits, see alignment E=1.1e-23

Best Hits

KEGG orthology group: None (inferred from 45% identity to xft:PD1541)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (143 amino acids)

>ABIE41_RS02895 GtrA family protein (Bosea sp. OAE506)
MSASSGAGEGSGLRGIALFIVNGLLATGVHYATLMLLLEVVRVPSAGLANGMASIVGIAA
SYVGNRLMVFRSSQPARATLPRFLLLYASLALFHAGFLALWSDRLGLPYGWGFIVSTGLA
TVMSYLGNRYFVFAGAAAPGSQA