Protein Info for ABIE40_RS27785 in Rhizobium sp. OAE497

Annotation: putative N-acetylmannosamine-6-phosphate 2-epimerase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 507 PF04131: NanE" amino acids 31 to 218 (188 residues), 241 bits, see alignment E=6.3e-76 PF00480: ROK" amino acids 232 to 505 (274 residues), 168.9 bits, see alignment E=1.9e-53

Best Hits

Swiss-Prot: 54% identical to NANEK_BRUME: Bifunctional enzyme NanE/NanK (nanEK) from Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)

KEGG orthology group: None (inferred from 71% identity to mci:Mesci_2621)

Predicted SEED Role

"N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)" in subsystem Sialic Acid Metabolism (EC 5.1.3.9)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 5.1.3.9

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (507 amino acids)

>ABIE40_RS27785 putative N-acetylmannosamine-6-phosphate 2-epimerase (Rhizobium sp. OAE497)
MKREDIRNSLIVSCQPVPDGPMDDARFVIGFANAAAAAGAKAVRIESVAYVKAARPHVKL
PIIGIVKRDLDDSPVRITPFIADVEALADAGADVIAFDATDRTRPAPVEALVTAAKARGK
LTMADCSSLEDARRALAAGVDFVGTTLSGYVGGPEPIEPDIALISAIRALTPYVIAEGRI
RTPEQAAQAADAGALAVVVGSAITRTEHATAWFHQAIDAAFSAREDAGKPVLAIDIGGTK
TMVALVEQDEVLEERVVRTRREEGPDAWLDAIAAETAGWAGHFARAGIAVTGFVEDGNWS
ALNPATLGIPDNYPLVARAEKRLGVPVIAINDAQAAAWGEYRFGSGRGEDIVFLTISTGI
GGGIVIDGRLASGLAGHFGLTRSPSQGVEPLEDMTSGLWIAAQAKAAGHDADAVTVFAEA
EKGAAWAKEIVERSALRVALLCSDIKLMLDPKRIVIGGGIGLAPGYLDQVRSQLGGLSSR
ITPNLVAAELGSRAGIIGAADLARSRA