Protein Info for ABIE40_RS22170 in Rhizobium sp. OAE497

Annotation: phosphatase PAP2 family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 344 transmembrane" amino acids 40 to 60 (21 residues), see Phobius details amino acids 66 to 88 (23 residues), see Phobius details amino acids 99 to 120 (22 residues), see Phobius details amino acids 153 to 176 (24 residues), see Phobius details amino acids 186 to 213 (28 residues), see Phobius details amino acids 254 to 274 (21 residues), see Phobius details amino acids 281 to 299 (19 residues), see Phobius details amino acids 305 to 324 (20 residues), see Phobius details PF14378: PAP2_3" amino acids 129 to 317 (189 residues), 116.7 bits, see alignment E=5.9e-38

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (344 amino acids)

>ABIE40_RS22170 phosphatase PAP2 family protein (Rhizobium sp. OAE497)
MRSAISGAVILISPLSFIPKNQLLREFLGVFMERCRPKRVLEVFIIVTYVSTFGLAAIGG
FKIDFIGIAPLVALVCIFLMIGAFCTRFGMLDIRAGIRCVVYALLLAPPITLSTYLGVWL
SMPLQDQNLAFADAALGFDWASTIYFVDSQPLLAAIFNVAYLTFSFQLLLWPLILAAFKH
EARARLMVAGFAVICFLSSFISIWTPAIGTYAYYGFDGATLKNLDILYGYYFLDEFNAVR
EDSNFVWNLASSKGILTFPSVHVATGLLCAWAAWPLKALRYPAILLNVAMACSAVTSAGH
YAIDVIAGCGVAMVSIAFLVWITGAGRSSAGGPEVSRSAISLSK