Protein Info for ABIE40_RS17830 in Rhizobium sp. OAE497

Annotation: OFA family MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 552 transmembrane" amino acids 32 to 56 (25 residues), see Phobius details amino acids 92 to 112 (21 residues), see Phobius details amino acids 121 to 140 (20 residues), see Phobius details amino acids 146 to 168 (23 residues), see Phobius details amino acids 184 to 204 (21 residues), see Phobius details amino acids 216 to 238 (23 residues), see Phobius details amino acids 276 to 297 (22 residues), see Phobius details amino acids 327 to 350 (24 residues), see Phobius details amino acids 362 to 381 (20 residues), see Phobius details amino acids 387 to 411 (25 residues), see Phobius details amino acids 424 to 445 (22 residues), see Phobius details amino acids 463 to 482 (20 residues), see Phobius details amino acids 526 to 546 (21 residues), see Phobius details PF07690: MFS_1" amino acids 79 to 439 (361 residues), 113 bits, see alignment E=7.7e-37

Best Hits

KEGG orthology group: None (inferred from 91% identity to rlt:Rleg2_3633)

Predicted SEED Role

"MFS permease"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (552 amino acids)

>ABIE40_RS17830 OFA family MFS transporter (Rhizobium sp. OAE497)
MTAADTSGAGVVAGAGLLDRERIIAQPGFNRWLVPPAALAIHLCIGMAYGFSVFWLPLSK
SLGISASTACPDLTLASALFTTSCDWRVADLGWIYTLFFVLLGCSAAIWGGWLERVGPRK
AGFVSACCWCGGILVAAVGVMTHQLWLMWLGAGVIGGIGLGLGYISPVSTLIKWFPDRRG
MATGMAIMGFGGGAMIGAPLANLLMNTFKTDTSVGVWQTFVVMAVIYFVFMMGGAFGYRI
PPAGWRPEGWTAPAAKSSMITTKHVHLRDAHKTKQFWLIWAVLCLNVSAGIGVLGMASPM
LQEIFAGSLIGLPDVGFAQLDAGQKASIATIAAGFAGLLSLFNIGGRFFWASLSDKIGRK
NTYFTFFILGIVLYAAAPTLADMGNKALFVLAFGIILSMYGGGFATIPAYLADIFGTQFV
GAIHGRLLTAWATAGIVGPVVVNYIREAQISAGVAPGPALYTGTMYILAGMLALGLIANL
FVRPLADKWFMSDAEVASLQAKSAAASAGPSGSFGIGRGGFDAKAAVAWAVVGIPLLWGV
WVTLKATLALFG