Protein Info for ABIE40_RS17425 in Rhizobium sp. OAE497

Annotation: MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 431 transmembrane" amino acids 17 to 41 (25 residues), see Phobius details amino acids 60 to 80 (21 residues), see Phobius details amino acids 87 to 106 (20 residues), see Phobius details amino acids 112 to 133 (22 residues), see Phobius details amino acids 145 to 166 (22 residues), see Phobius details amino acids 176 to 196 (21 residues), see Phobius details amino acids 241 to 260 (20 residues), see Phobius details amino acids 272 to 295 (24 residues), see Phobius details amino acids 307 to 325 (19 residues), see Phobius details amino acids 331 to 352 (22 residues), see Phobius details amino acids 364 to 385 (22 residues), see Phobius details amino acids 396 to 416 (21 residues), see Phobius details PF07690: MFS_1" amino acids 26 to 342 (317 residues), 122 bits, see alignment E=1.4e-39 amino acids 270 to 419 (150 residues), 46.8 bits, see alignment E=1e-16

Best Hits

KEGG orthology group: None (inferred from 91% identity to rec:RHECIAT_CH0004046)

Predicted SEED Role

"MFS permease"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (431 amino acids)

>ABIE40_RS17425 MFS transporter (Rhizobium sp. OAE497)
MVSTALASTLARRNIHYGWIIVAATFLTMLVTAGAMGAPGVLIKPLQDEFGWETSQISSA
LAIRLILFGLMGPFAAAFMNYFGVRKVIVFALGLIGAGFIGSLFMTSLWQLLVLWGIVVG
FGTGLTAMVLAATVSARWFTKHRGLVVGMLSASSATGQLVFLPLMAELTERYGWRSTVFF
VCAMIMVAALVVLLFMRDRPSDLNLPSVGEAHVTAAPARGTLIDALKMPLVILREVSTTS
TFWILFATFFICGLSTNGLIQTHFVTLCGDFGILPVAAASVLAVMGIFDFFGTIGSGWLS
DRFDNRWLLFWYYGLRGLSLLFLPFSDFTFYGLSIFAVFYGLDWIATVPPTVKIAADRFG
KEKVGLVFGWVFAGHQLGAATAAYGAGLSRTELQSYLPAFFIAGAFCLLASILAITLKKP
GIGSAGEAIAH