Protein Info for ABIE40_RS01570 in Rhizobium sp. OAE497
Annotation: amidohydrolase family protein
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
KEGG orthology group: K01466, allantoinase [EC: 3.5.2.5] (inferred from 92% identity to ara:Arad_0591)Predicted SEED Role
"Allantoinase (EC 3.5.2.5)" in subsystem Allantoin Utilization (EC 3.5.2.5)
MetaCyc Pathways
- superpathway of purines degradation in plants (13/18 steps found)
- allantoin degradation to ureidoglycolate I (urea producing) (1/2 steps found)
- allantoin degradation to glyoxylate I (1/3 steps found)
- superpathway of allantoin degradation in yeast (3/6 steps found)
- allantoin degradation IV (anaerobic) (5/9 steps found)
- allantoin degradation to glyoxylate II (2/5 steps found)
- allantoin degradation to ureidoglycolate II (ammonia producing) (1/4 steps found)
- allantoin degradation to glyoxylate III (1/5 steps found)
- superpathway of allantoin degradation in plants (3/8 steps found)
KEGG Metabolic Maps
Isozymes
No predicted isozymesUse Curated BLAST to search for 3.5.2.5
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (460 amino acids)
>ABIE40_RS01570 amidohydrolase family protein (Rhizobium sp. OAE497) MADFDLVLQGTVVLPERILEQGYVAVRDGKIAEVGVGVPPAAKERHLLGKALILPGAIDA QTHSLSQKDQEDFLWSTRSAAAGGVTTIVDMPYDEGNLVCSAAAVKKKVDHASPQARVDF ALYGTVDPEEGAVRIREMVDAGVAAFKFSTFGTDAKRFPRIPPALLDECFAAIAPTGLTA GVHNEDDEAVRTYMEKVKASGITDWRAHGLSRPPITELLAMHTIFETGAHTGCPSHVVHC SLGRGYDIARAYRRDGFEATVECCIHYLTLDEENDVKRLGGKAKINPPIRPRAEVETLWR KVAEGNVWLVSTDHVSWSENRKTNPDMLANSSGVPGLEAMVPLFVKGALERGVSLTWAAK LMAENPAKHFRLNHIKGALTPGKDADIVVLEPREMVYDAAASGNNIVGWSPYNGIRLPWT VSAAYLRGEKITDGAKVLSEPGNGKFVRPLPRHVIAGEAA