Protein Info for ABID97_RS14930 in Variovorax sp. OAS795

Annotation: leucyl/phenylalanyl-tRNA--protein transferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 251 TIGR00667: leucyl/phenylalanyl-tRNA--protein transferase" amino acids 37 to 226 (190 residues), 163.7 bits, see alignment E=1.8e-52 PF03588: Leu_Phe_trans" amino acids 39 to 212 (174 residues), 233.2 bits, see alignment E=6.4e-74

Best Hits

Swiss-Prot: 65% identical to LFTR_POLSJ: Leucyl/phenylalanyl-tRNA--protein transferase (aat) from Polaromonas sp. (strain JS666 / ATCC BAA-500)

KEGG orthology group: K00684, leucyl/phenylalanyl-tRNA--protein transferase [EC: 2.3.2.6] (inferred from 91% identity to vap:Vapar_2378)

Predicted SEED Role

"Leucyl/phenylalanyl-tRNA--protein transferase (EC 2.3.2.6)" in subsystem Protein degradation (EC 2.3.2.6)

MetaCyc Pathways

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.3.2.6

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (251 amino acids)

>ABID97_RS14930 leucyl/phenylalanyl-tRNA--protein transferase (Variovorax sp. OAS795)
MQQLPWLEPGDALPDPSSAWGEADPVPGLLAAGGALDVDTLVQAYGRCVFPWFSEDQPIL
WWSPDPRMVLQVAEFRLHRSLRKTLARFAQAPNCEVRIDHDFGAVIRACSQSPRTGQSGT
WIVPDMVNAYMALHRAGHAHSVETWVDGQLAGGLYCVGLGRAVFGESMFTRRPDASKIAL
AALVCLCRRSQVRMIDCQQNTSHLASLGAREMSRASFVAHVAKAREQQGPQWHFEPVYWT
ELLSTRPSEST