Protein Info for ABID97_RS14170 in Variovorax sp. OAS795

Annotation: protein phosphatase 2C domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 256 PF13672: PP2C_2" amino acids 21 to 203 (183 residues), 36.9 bits, see alignment E=1.5e-13

Best Hits

KEGG orthology group: None (inferred from 94% identity to vap:Vapar_2176)

Predicted SEED Role

"Protein phosphatase 2C-like"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (256 amino acids)

>ABID97_RS14170 protein phosphatase 2C domain-containing protein (Variovorax sp. OAS795)
MTQGFRLVAATGLHKGDRPYQQDQVLMMSHPRVPGCMLGVIADGMGGRSGGRKASDQVLM
TARQLFSRYSPERDSSTAVLRQLLEDAHTVIKLTALSSEQEPHSTLAAFLMNPKGDCAWI
HAGDSRIYHFQDGQLVTRTRDHSYVQVLIDRGEISEAEANVHPKGNILLGCLGMTTMPPP
IEPHYIPAMQPGDLLMACSDGLWHYFSPDELASVLYAEPPREAVEILVGEARRRARGTGD
NISIAVLKLEALPAEA