Protein Info for ABID97_RS11330 in Variovorax sp. OAS795
Annotation: enoyl-CoA hydratase-related protein
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
KEGG orthology group: K01715, 3-hydroxybutyryl-CoA dehydratase [EC: 4.2.1.55] (inferred from 74% identity to rpc:RPC_0858)Predicted SEED Role
"3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)" in subsystem Acetyl-CoA fermentation to Butyrate or Polyhydroxybutyrate metabolism (EC 4.2.1.55)
MetaCyc Pathways
- (2S)-ethylmalonyl-CoA biosynthesis (3/4 steps found)
- acetyl-CoA fermentation to butanoate (5/7 steps found)
- ethylmalonyl-CoA pathway (4/11 steps found)
KEGG Metabolic Maps
Isozymes
No predicted isozymesUse Curated BLAST to search for 4.2.1.55
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (264 amino acids)
>ABID97_RS11330 enoyl-CoA hydratase-related protein (Variovorax sp. OAS795) MSYQDIIVEQVEGWLEITIHRPEKMNSLRETTAEEILDALGEAESNREIAAVILRGSDKA FCTGIDTSEFTIGDNEYFDFYRKRRRSRKVNELFRSLPGYSKPIISAIEGFALGGGLELA LVGDMIVAGANAKFGLPEIRLGLMPGGGGTQTLPRLIGPALAKELMWTGRRITAAEAREY RLVNHVTEAGKAIDKARELARTIAGNAPLSVMFTKAVIDRGMDLPLAEGMAAEGDVSFML YFTQDRQEGLSAFREKRTPDFRGE