Protein Info for ABID97_RS03700 in Variovorax sp. OAS795

Annotation: class II aldolase/adducin family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 264 PF00596: Aldolase_II" amino acids 27 to 211 (185 residues), 163.3 bits, see alignment E=3e-52

Best Hits

KEGG orthology group: None (inferred from 96% identity to vap:Vapar_0235)

Predicted SEED Role

"Class II aldolase/adducin, N-terminal"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (264 amino acids)

>ABID97_RS03700 class II aldolase/adducin family protein (Variovorax sp. OAS795)
MNTLATPAAPSALVHPSIHPDERAAREQLAACYRVFAMLGWTEMIYNHITVRLPDSVTGG
AKQFLINPFGLHYSEVTASNLVKIDLEGKVLDGSTWPVNPAGFTVHAAIHDGLPGAHCVM
HTHTTAGVAVACLQGGLQQTNFYTAQLHGMVAYHDFEGITIHADEGPRLLRSIGDRKAVI
LRNHGLLAWGQTLPQTFAILWTLQRACEIQMATFSMGAAIPVSEEIARRCTRDALQFSPE
HGAGQDVFDALVRQVDRIDPSYKN