Protein Info for ABID97_RS01365 in Variovorax sp. OAS795

Annotation: alpha/beta hydrolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 312 PF10340: Say1_Mug180" amino acids 80 to 195 (116 residues), 39.5 bits, see alignment E=5e-14 PF07859: Abhydrolase_3" amino acids 85 to 286 (202 residues), 197 bits, see alignment E=5.3e-62 PF20434: BD-FAE" amino acids 85 to 172 (88 residues), 33.8 bits, see alignment E=3.9e-12

Best Hits

KEGG orthology group: None (inferred from 40% identity to pla:Plav_0870)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (312 amino acids)

>ABID97_RS01365 alpha/beta hydrolase (Variovorax sp. OAS795)
MKYTSIERSSAQSLAVRENTRGFRASCEQPDAVSVQERRLAIAGMMEEGYSQHVRRDGDV
FGSVDMNGVPAEVVGIAGTTSDCNLLFIHGGAYCLGSPQTARTLSVPLARDANARVFVPD
YRLAPEHRFPAAADDVLAAYKYLVEVEKADPARLFIGGDSCGVNLALGAVLRARQAGLPA
PRGIVAFSPWLDLTSSLPSFRTNAQRDEFVHPNIVDTWVAQYMGQESWAHPLASPLGADL
GGMPACFIACGSTEMWHDDAAVLANRLDKLGVDVELEVWKDMPHVWPIFAGQLPEADEAL
ANAARFMRRCLR