Protein Info for ABI39_RS12225 in Phocaeicola dorei CL03T12C01

Annotation: potassium transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 609 transmembrane" amino acids 22 to 43 (22 residues), see Phobius details amino acids 59 to 78 (20 residues), see Phobius details amino acids 90 to 107 (18 residues), see Phobius details amino acids 127 to 149 (23 residues), see Phobius details amino acids 157 to 176 (20 residues), see Phobius details amino acids 183 to 204 (22 residues), see Phobius details amino acids 216 to 242 (27 residues), see Phobius details amino acids 268 to 291 (24 residues), see Phobius details amino acids 303 to 324 (22 residues), see Phobius details amino acids 337 to 360 (24 residues), see Phobius details amino acids 391 to 413 (23 residues), see Phobius details amino acids 444 to 466 (23 residues), see Phobius details amino acids 477 to 495 (19 residues), see Phobius details amino acids 515 to 534 (20 residues), see Phobius details amino acids 540 to 558 (19 residues), see Phobius details amino acids 570 to 591 (22 residues), see Phobius details PF02386: TrkH" amino acids 155 to 591 (437 residues), 166.9 bits, see alignment E=3.2e-53

Best Hits

KEGG orthology group: None (inferred from 98% identity to bvu:BVU_2440)

Predicted SEED Role

"Potassium uptake protein, integral membrane component, KtrB" in subsystem Potassium homeostasis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (609 amino acids)

>ABI39_RS12225 potassium transporter (Phocaeicola dorei CL03T12C01)
MEPLHKLFIYRKKLVKPYIERLLKWMDGITYMMSALLILTLVYEHGFLISFEEMEVINML
YHFVWIVFLVDISLHLLLNYSDTKRKYRGLAWILSLMLYLTLIPVIFHEPEVQGGIHDFW
SFFHSRLYHVVLLTLLSLLQLSNGIVRLLGRRTNPSLIFASSFLIFILIGAALLMLPRAT
YHGISFIDALFTATSATCVTGLVSVDVSSTFTPEGLFIIIMLIQIGGLGVMTLTSFFAMF
FMGNTSLYNQLVVRDMVSSQSLSSLLSTLLYILGFTLAIEAAGMGVIFLSIHGTMGMDIE
EELAFSAFHSISAFCNAGFSTLYGNLSNELVLHNHNLLYITISFLIILGGIGFPILVNLY
ETVSYESKRLYHRYVKKNKRTIRKIHLYNLNTRIVLIMTAILLVTGTVAIVIFEWNHAFA
GMTVTEKWVQGFFNATCPRTAGFSSVGMTTFSVQTLLLMVVLMMIGGGTQSTAGGVKVNV
FAVVMLNLRAILIGADKVNIFNRELSHDSIRRSNATLILYLLIVFAGIFSLSILEPQASV
MALVFECTSALSTVGSSLDLTPTLGSDSKLIVIVLMFIGRVGVLTLISSLIKQKKITKYK
YPSDNIIIN